C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: cell growth regulator with ring finger domain 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000133790 Cgrrf1-003 ENSMUSG00000055128 10090 + 14:46832244-46848059 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainOvaryENSMUST00000133790
Transcript ID Brain Ovary
ENSMUST00000133790 0.280±0.00 0.458±0.18

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008KQ CIL_0008KQ_0002 VISTA 14:46305651-46906520
CIL_00090Z CIL_00090Z_0002 VISTA 14:46310670-46911777
CIL_0000HK CIL_0000HK_0002 CGP 14:46808149-46854193
CIL_0004OT CIL_0004OT_0002 CGP 14:46832134-47105817

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000216420 CGRRF1-001 protein_coding Homo_sapiens 0 464
ENST00000554791 CGRRF1-009 nonsense_mediated_decay Homo_sapiens 0 348
ENST00000556216 CGRRF1-002 retained_intron Homo_sapiens 0 481
ENST00000557184 CGRRF1-008 processed_transcript Homo_sapiens 0 315
ENST00000557317 CGRRF1-004 protein_coding Homo_sapiens 0 348
ENST00000557512 CGRRF1-007 processed_transcript Homo_sapiens 0 315
ENST00000557755 CGRRF1-006 nonsense_mediated_decay Homo_sapiens 0 207

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