C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: signal transducing adaptor molecule (SH3 domain and ITAM motif) 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000055371 Stam2 10090 - 2:52691664-52742281 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000102759 Stam2-001 52691664-52742200 protein_coding
  ENSMUST00000127316 Stam2-002 52699502-52742281 protein_coding
  ENSMUST00000138290 Stam2-004 52719714-52742156 protein_coding
  ENSMUST00000150582 Stam2-003 52709397-52742180 retained_intron
  ENSMUST00000155516 Stam2-005 52709679-52742190 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000102759ENSMUST00000127316ENSMUST00000150582ENSMUST00000155516
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000102759 7.257±1.75 11.665±1.56 2.389±0.18 6.634±2.99 5.538±1.51 13.133±1.23 1.977±1.58 4.845±1.82 2.880±0.72 7.917±0.18 1.557±0.52 9.679±3.22 5.576±2.15 7.425±2.79
ENSMUST00000127316 N/A N/A N/A 2.473±0.00 N/A N/A N/A N/A N/A N/A N/A 3.280±0.00 8.647±1.07 8.112±4.86
ENSMUST00000150582 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 6.717±0.00 6.481±2.30 11.304±0.00
ENSMUST00000155516 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 8.605±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007E3 CIL_0007E3_0002 CGP 2:52428320-52742281
CIL_0007E6 CIL_0007E6_0002 CGP 2:52691664-53134202

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0005768 IEA endosome
GO:0006886 IEA intracellular protein transport
GO:0016020 IEA membrane
GO:0043231 IEA intracellular membrane-bounded organelle

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000005318 stam2 signal transducing adaptor molecule (SH3 domain and ITAM motif) 2 protein_coding Danio_rerio
ENSG00000115145 STAM2 signal transducing adaptor molecule (SH3 domain and ITAM motif) 2 protein_coding Homo_sapiens

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