C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: signal transducing adaptor molecule (SH3 domain and ITAM motif) 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000102759 Stam2-001 ENSMUSG00000055371 10090 - 2:52691664-52742200 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000102759
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000102759 7.257±1.75 11.665±1.56 2.389±0.18 6.634±2.99 5.538±1.51 13.133±1.23 1.977±1.58 4.845±1.82 2.880±0.72 7.917±0.18 1.557±0.52 9.679±3.22 5.576±2.15 7.425±2.79

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007E3 CIL_0007E3_0002 CGP 2:52428320-52742281
CIL_0007E6 CIL_0007E6_0002 CGP 2:52691664-53134202

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0005768 IEA endosome
GO:0006886 IEA intracellular protein transport
GO:0016020 IEA membrane
GO:0043231 IEA intracellular membrane-bounded organelle

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000263904 STAM2-001 protein_coding Homo_sapiens 0 1748
ENST00000463854 STAM2-002 retained_intron Homo_sapiens 0 1256
ENST00000465460 STAM2-006 processed_transcript Homo_sapiens 0 505
ENST00000482997 STAM2-004 retained_intron Homo_sapiens 0 1404
ENST00000494589 STAM2-005 retained_intron Homo_sapiens 0 562

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