C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: signal transducing adaptor molecule (SH3 domain and ITAM motif) 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000155516 Stam2-005 ENSMUSG00000055371 10090 - 2:52709679-52742190 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; PlacentaENSMUST00000155516
Transcript ID Placenta
ENSMUST00000155516 8.605±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007E3 CIL_0007E3_0002 CGP 2:52428320-52742281
CIL_0007E6 CIL_0007E6_0002 CGP 2:52691664-53134202

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000263904 STAM2-001 protein_coding Homo_sapiens 0 802
ENST00000463854 STAM2-002 retained_intron Homo_sapiens 0 802
ENST00000465460 STAM2-006 processed_transcript Homo_sapiens 0 505
ENST00000482997 STAM2-004 retained_intron Homo_sapiens 0 802
ENST00000494589 STAM2-005 retained_intron Homo_sapiens 0 562

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