C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: sparc/osteonectin, cwcv and kazal-like domains proteoglycan 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000056222 Spock1 10090 - 13:57421195-57908314 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000172326 Spock1-201 57429295-57907587 protein_coding
  ENSMUST00000185502 Spock1-002 57426094-57908275 protein_coding
  ENSMUST00000185905 Spock1-004 57434415-57908299 retained_intron
  ENSMUST00000186271 Spock1-005 57428710-57908291 protein_coding
  ENSMUST00000187852 Spock1-001 57421195-57908314 protein_coding
  ENSMUST00000189373 Spock1-003 57421207-57908275 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000172326ENSMUST00000185502ENSMUST00000185905ENSMUST00000186271ENSMUST00000187852ENSMUST00000189373
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000172326 0.032±0.02 N/A 6.320±0.00 0.090±0.00 0.743±0.12 0.027±0.01 0.062±0.02 0.028±0.01 0.043±0.00 0.038±0.00 0.579±0.15 0.216±0.00 0.400±0.25
ENSMUST00000185502 0.038±0.01 N/A 17.923±5.73 0.064±0.03 0.068±0.02 0.011±0.00 0.067±0.02 0.028±0.04 0.025±0.00 N/A 0.189±0.08 0.118±0.07 0.079±0.01
ENSMUST00000185905 N/A N/A N/A 0.031±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.048±0.00
ENSMUST00000186271 N/A 1.957±0.43 74.782±0.00 0.037±0.00 0.207±0.00 N/A 0.076±0.00 0.053±0.04 0.016±0.00 0.026±0.00 0.346±0.17 1.010±0.63 0.198±0.09
ENSMUST00000187852 N/A 1.764±0.93 N/A 0.071±0.00 0.184±0.00 N/A N/A N/A 0.013±0.01 N/A N/A N/A N/A
ENSMUST00000189373 0.018±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005P0 CIL_0005P0_0002 CGP 13:56773113-57908314
CIL_0005P1 CIL_0005P1_0002 CGP 13:57421195-58113592

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004869 IEA cysteine-type endopeptidase inhibitor activity
GO:0005509 IEA calcium ion binding
GO:0005578 IEA proteinaceous extracellular matrix
GO:0005615 IEA extracellular space
GO:0007165 IEA signal transduction
GO:0008191 IEA metalloendopeptidase inhibitor activity
GO:0010812 IEA negative regulation of cell-substrate adhesion
GO:0010951 IEA negative regulation of endopeptidase activity
GO:0010977 IEA negative regulation of neuron projection development

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000074644 SPOCK1 sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 1 protein_coding Danio_rerio
ENSG00000152377 SPOCK1 sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 1 protein_coding Homo_sapiens

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