C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0005P1_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000152377-ENSG00000146021 CGP 9606 5:136975298-137736090
GeneTranscriptPositionBiotype
ENSG00000146021 (KLHL3)
kelch-like family member 3 		ENST00000309755 (KLHL3-001) 137617500-137736090 protein_coding
ENST00000447439 (KLHL3-009) 137621221-137629943 retained_intron
ENST00000502381 (KLHL3-007) 137634044-137673897 processed_transcript
ENST00000504208 (KLHL3-005) 137621939-137706427 nonsense_mediated_decay
ENST00000504496 (KLHL3-006) 137660711-137692685 processed_transcript
ENST00000505853 (KLHL3-002) 137637294-137736015 protein_coding
ENST00000506491 (KLHL3-004) 137617500-137706436 protein_coding
ENST00000506873 (KLHL3-008) 137621502-137672927 processed_transcript
ENST00000508657 (KLHL3-003) 137617500-137721310 protein_coding
ENST00000509694 (KLHL3-014) 137617659-137628680 retained_intron
ENST00000510529 (KLHL3-013) 137677417-137698383 processed_transcript
ENST00000512977 (KLHL3-010) 137706050-137735858 processed_transcript
ENST00000514149 (KLHL3-011) 137671767-137673851 processed_transcript
ENST00000515334 (KLHL3-012) 137672754-137706139 processed_transcript
ENSG00000152377 (SPOCK1)
sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 1 		ENST00000282223 (SPOCK1-201) 136975300-137267065 protein_coding
ENST00000394945 (SPOCK1-001) 136975298-137499348 protein_coding
ENST00000503916 (SPOCK1-002) 137112494-137598379 processed_transcript
ENST00000505690 (SPOCK1-003) 137112492-137498594 protein_coding
ENST00000508642 (SPOCK1-007) 136988553-136993160 processed_transcript
ENST00000509293 (SPOCK1-005) 137267015-137365461 processed_transcript
ENST00000509978 (SPOCK1-008) 136978792-136988837 processed_transcript
ENST00000510405 (SPOCK1-006) 137112435-137313538 protein_coding
ENST00000510689 (SPOCK1-004) 136992554-137499299 protein_coding
ENST00000515091 (SPOCK1-009) 136978454-136979500 retained_intron
CIL_0005P1_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000056222-ENSMUSG00000014164 CGP 10090 13:57421195-58113592
GeneTranscriptPositionBiotype
ENSMUSG00000014164 (Klhl3)
kelch-like 3 		ENSMUST00000091583 (Klhl3-201) 58004957-58102428 protein_coding
ENSMUST00000160860 (Klhl3-001) 58004221-58113592 protein_coding
ENSMUSG00000056222 (Spock1)
sparc/osteonectin, cwcv and kazal-like domains proteoglycan 1 		ENSMUST00000172326 (Spock1-201) 57429295-57907587 protein_coding
ENSMUST00000185502 (Spock1-002) 57426094-57908275 protein_coding
ENSMUST00000185905 (Spock1-004) 57434415-57908299 retained_intron
ENSMUST00000186271 (Spock1-005) 57428710-57908291 protein_coding
ENSMUST00000187852 (Spock1-001) 57421195-57908314 protein_coding
ENSMUST00000189373 (Spock1-003) 57421207-57908275 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005P1_0001ENSG00000146021ENST00000309755ENST00000447439ENST00000502381ENST00000504208ENST00000504496ENST00000505853ENST00000506491ENST00000506873ENST00000508657ENST00000509694ENST00000510529ENST00000512977ENST00000514149ENST00000515334ENSG00000152377ENST00000282223ENST00000394945ENST00000503916ENST00000505690ENST00000508642ENST00000509293ENST00000509978ENST00000510405ENST00000510689ENST00000515091CIL_0005P1_0002ENSMUSG00000014164ENSMUST00000091583ENSMUST00000160860ENSMUSG00000056222ENSMUST00000172326ENSMUST00000185502ENSMUST00000185905ENSMUST00000186271ENSMUST00000187852ENSMUST00000189373
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005P1_0001ENSG00000146021ENST00000309755ENST00000447439ENST00000504208ENST00000505853ENST00000506491ENST00000508657ENST00000510529ENSG00000152377ENST00000282223ENST00000394945ENST00000505690ENST00000509978ENST00000510405ENST00000515091CIL_0005P1_0002ENSMUSG00000014164ENSMUST00000091583ENSMUST00000160860ENSMUSG00000056222ENSMUST00000172326ENSMUST00000185502ENSMUST00000185905ENSMUST00000186271ENSMUST00000187852ENSMUST00000189373
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000146021 ENST00000309755 0.812±0.00 1.274±0.00 N/A 1.373±0.45 0.500±0.00 0.141±0.06 1.931±0.43 N/A 0.288±0.00 N/A N/A 0.404±0.17 0.117±0.01 0.900±0.63
ENST00000447439 N/A N/A N/A N/A N/A 0.211±0.00 N/A N/A 0.855±0.00 N/A N/A 0.868±0.00 N/A N/A
ENST00000502381 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000504208 N/A N/A N/A N/A N/A N/A N/A N/A 0.798±0.00 N/A N/A N/A N/A N/A
ENST00000504496 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000505853 N/A N/A N/A N/A N/A N/A N/A 0.511±0.00 N/A N/A 0.417±0.00 N/A N/A N/A
ENST00000506491 N/A N/A N/A N/A N/A N/A N/A N/A 0.049±0.00 N/A N/A N/A N/A 0.985±0.00
ENST00000506873 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000508657 N/A N/A N/A 0.932±0.00 0.380±0.00 N/A N/A N/A N/A 0.810±0.00 N/A N/A N/A 0.179±0.00
ENST00000509694 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000510529 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.439±0.00 N/A N/A N/A
ENST00000512977 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000514149 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000515334 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000152377 ENST00000282223 N/A 0.398±0.00 0.806±0.00 N/A 0.879±0.00 0.103±0.00 N/A 0.014±0.00 N/A 0.139±0.00 N/A 0.306±0.00 2.976±0.02 N/A
ENST00000394945 37.015±0.00 0.459±0.00 0.866±0.00 37.848±29.92 2.617±0.71 16.926±0.00 2.557±2.09 11.322±0.00 2.749±0.00 0.473±0.00 10.407±0.00 0.730±0.00 3.855±2.75 7.321±0.00
ENST00000503916 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000505690 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.290±0.00 N/A N/A N/A N/A
ENST00000508642 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000509293 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000509978 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.441±0.00 N/A N/A N/A
ENST00000510405 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.377±0.00 N/A N/A N/A N/A
ENST00000510689 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000515091 N/A N/A N/A N/A N/A N/A N/A 0.062±0.00 N/A N/A N/A 0.431±0.00 12.846±0.00 9.163±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000014164 ENSMUST00000091583 N/A 0.461±0.12 N/A N/A 0.316±0.05 0.179±0.01 0.443±0.10 N/A 0.593±0.36 N/A 0.071±0.00 1.306±0.47 N/A 1.483±0.19
ENSMUST00000160860 0.291±0.04 0.321±0.16 N/A N/A 0.580±0.17 0.322±0.16 0.714±0.18 1.451±0.23 0.250±0.00 0.527±0.35 0.160±0.08 1.137±0.43 0.111±0.03 N/A
ENSMUSG00000056222 ENSMUST00000172326 0.032±0.02 N/A N/A 6.320±0.00 0.090±0.00 0.743±0.12 0.027±0.01 0.062±0.02 0.028±0.01 0.043±0.00 0.038±0.00 0.579±0.15 0.216±0.00 0.400±0.25
ENSMUST00000185502 0.038±0.01 N/A N/A 17.923±5.73 0.064±0.03 0.068±0.02 0.011±0.00 0.067±0.02 0.028±0.04 0.025±0.00 N/A 0.189±0.08 0.118±0.07 0.079±0.01
ENSMUST00000185905 N/A N/A N/A N/A 0.031±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.048±0.00
ENSMUST00000186271 N/A 1.957±0.43 N/A 74.782±0.00 0.037±0.00 0.207±0.00 N/A 0.076±0.00 0.053±0.04 0.016±0.00 0.026±0.00 0.346±0.17 1.010±0.63 0.198±0.09
ENSMUST00000187852 N/A 1.764±0.93 N/A N/A 0.071±0.00 0.184±0.00 N/A N/A N/A 0.013±0.01 N/A N/A N/A N/A
ENSMUST00000189373 0.018±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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