C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: sparc/osteonectin, cwcv and kazal-like domains proteoglycan 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000172326 Spock1-201 ENSMUSG00000056222 10090 - 13:57429295-57907587 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000172326
Transcript ID Adipose Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000172326 0.032±0.02 6.320±0.00 0.090±0.00 0.743±0.12 0.027±0.01 0.062±0.02 0.028±0.01 0.043±0.00 0.038±0.00 0.579±0.15 0.216±0.00 0.400±0.25

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005P0 CIL_0005P0_0002 CGP 13:56773113-57908314
CIL_0005P1 CIL_0005P1_0002 CGP 13:57421195-58113592

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005509 IEA calcium ion binding
GO:0005578 IEA proteinaceous extracellular matrix
GO:0007165 IEA signal transduction

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000282223 SPOCK1-201 protein_coding Homo_sapiens 0 1435
ENST00000394945 SPOCK1-001 protein_coding Homo_sapiens 0 1690
ENST00000503916 SPOCK1-002 processed_transcript Homo_sapiens 0 320
ENST00000505690 SPOCK1-003 protein_coding Homo_sapiens 0 575
ENST00000508642 SPOCK1-007 processed_transcript Homo_sapiens 0 246
ENST00000509293 SPOCK1-005 processed_transcript Homo_sapiens 0.000000004 66
ENST00000509978 SPOCK1-008 processed_transcript Homo_sapiens 0 619
ENST00000510405 SPOCK1-006 protein_coding Homo_sapiens 0 383
ENST00000510689 SPOCK1-004 protein_coding Homo_sapiens 0 575
ENST00000515091 SPOCK1-009 retained_intron Homo_sapiens 0 444

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