C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: sparc/osteonectin, cwcv and kazal-like domains proteoglycan 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000186271 Spock1-005 ENSMUSG00000056222 10090 - 13:57428710-57908291 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastColonKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000186271
Transcript ID Adrenal Brain Breast Colon Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000186271 1.957±0.43 74.782±0.00 0.037±0.00 0.207±0.00 0.076±0.00 0.053±0.04 0.016±0.00 0.026±0.00 0.346±0.17 1.010±0.63 0.198±0.09

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005P0 CIL_0005P0_0002 CGP 13:56773113-57908314
CIL_0005P1 CIL_0005P1_0002 CGP 13:57421195-58113592

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004869 IEA cysteine-type endopeptidase inhibitor activity
GO:0005509 IEA calcium ion binding
GO:0005578 IEA proteinaceous extracellular matrix
GO:0005615 IEA extracellular space
GO:0007165 IEA signal transduction
GO:0008191 IEA metalloendopeptidase inhibitor activity
GO:0010812 IEA negative regulation of cell-substrate adhesion
GO:0010951 IEA negative regulation of endopeptidase activity
GO:0010977 IEA negative regulation of neuron projection development

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000282223 SPOCK1-201 protein_coding Homo_sapiens 0 1764
ENST00000394945 SPOCK1-001 protein_coding Homo_sapiens 0 2076
ENST00000503916 SPOCK1-002 processed_transcript Homo_sapiens 0 320
ENST00000505690 SPOCK1-003 protein_coding Homo_sapiens 0 579
ENST00000508642 SPOCK1-007 processed_transcript Homo_sapiens 0 246
ENST00000509293 SPOCK1-005 processed_transcript Homo_sapiens 0.000000004 66
ENST00000509978 SPOCK1-008 processed_transcript Homo_sapiens 0 619
ENST00000510405 SPOCK1-006 protein_coding Homo_sapiens 0 383
ENST00000510689 SPOCK1-004 protein_coding Homo_sapiens 0 575
ENST00000515091 SPOCK1-009 retained_intron Homo_sapiens 0 597

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