C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: chromodomain protein, Y chromosome-like
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000075220 Cdyl-201 ENSMUSG00000059288 10090 + 13:35659862-35874064 protein_coding

Mus musculus EnsemblGRCm38

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainHeartLiverLungMuscleOvaryTestisENSMUST00000075220
Transcript ID Adrenal Brain Heart Liver Lung Muscle Ovary Testis
ENSMUST00000075220 1.522±0.00 0.332±0.00 0.195±0.01 0.296±0.12 0.617±0.00 0.134±0.01 0.596±0.00 34.170±8.19

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003IM CIL_0003IM_0002 CGP 13:34977748-35874064
CIL_000162 CIL_000162_0003 CGP 13:35659862-35906359

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003714 ISS transcription corepressor activity
GO:0004402 IEA histone acetyltransferase activity
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0016573 IEA histone acetylation
GO:0035064 ISS methylated histone binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000328908 CDYL-001 protein_coding Homo_sapiens 0 1796
ENST00000343762 CDYL-003 protein_coding Homo_sapiens 0 1794
ENST00000397588 CDYL-006 protein_coding Homo_sapiens 0 1794
ENST00000418290 CDY4P-001 processed_pseudogene Homo_sapiens 0 357
ENST00000440139 CDYL-009 protein_coding Homo_sapiens 0 621
ENST00000449732 CDYL-007 protein_coding Homo_sapiens 0 1790
ENST00000469671 CDYL-011 retained_intron Homo_sapiens 0 880
ENST00000472453 CDYL-008 processed_transcript Homo_sapiens 0 1238

Loading