C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: gem (nuclear organelle) associated protein 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000060121 Gemin2 10090 + 12:59013393-59028470 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000021379 Gemin2-001 59013393-59028470 protein_coding
  ENSMUST00000182188 Gemin2-002 59013454-59028399 retained_intron
  ENSMUST00000182710 Gemin2-003 59024666-59027887 retained_intron

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000021379ENSMUST00000182188
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000021379 1.287±0.46 2.112±0.48 3.336±0.13 2.492±1.02 1.212±0.49 2.358±0.59 1.589±0.31 1.850±0.46 6.705±2.98 1.923±0.13 2.362±0.32 2.591±1.19 5.186±2.48 2.255±0.33
ENSMUST00000182188 0.993±0.18 0.837±0.36 N/A 0.460±0.00 0.440±0.14 1.191±0.04 0.317±0.05 0.474±0.19 0.989±0.30 0.522±0.24 N/A 0.862±0.24 0.387±0.00 0.622±0.17

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003VW CIL_0003VW_0002 CGP 12:58958383-59028470
CIL_0003VX CIL_0003VX_0002 CGP 12:59013393-59061461

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000245 IEA spliceosomal complex assembly
GO:0000387 ISS spliceosomal snRNP assembly
GO:0005515 IEA protein binding
GO:0005622 IDA intracellular
GO:0005634 IDA nucleus
GO:0005681 IEA spliceosomal complex
GO:0005730 IEA nucleolus
GO:0005737 IDA cytoplasm
GO:0005829 ISS cytosol
GO:0032797 ISS SMN complex
GO:0034719 ISS SMN-Sm protein complex

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000015638 gemin2 gem (nuclear organelle) associated protein 2 protein_coding Danio_rerio
ENSG00000092208 GEMIN2 gem (nuclear organelle) associated protein 2 protein_coding Homo_sapiens

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