C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: gem (nuclear organelle) associated protein 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000182188 Gemin2-002 ENSMUSG00000060121 10090 + 12:59013454-59028399 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000182188
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000182188 0.993±0.18 0.837±0.36 0.460±0.00 0.440±0.14 1.191±0.04 0.317±0.05 0.474±0.19 0.989±0.30 0.522±0.24 0.862±0.24 0.387±0.00 0.622±0.17

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003VW CIL_0003VW_0002 CGP 12:58958383-59028470
CIL_0003VX CIL_0003VX_0002 CGP 12:59013393-59061461

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000250379 GEMIN2-002 protein_coding Homo_sapiens 0 416
ENST00000308317 GEMIN2-001 protein_coding Homo_sapiens 0 798
ENST00000396249 GEMIN2-003 protein_coding Homo_sapiens 0 636
ENST00000412033 GEMIN2-005 nonsense_mediated_decay Homo_sapiens 0 760
ENST00000418195 GEMIN2P2-001 processed_pseudogene Homo_sapiens 1e-25 121
ENST00000454246 GEMIN2P1-001 processed_pseudogene Homo_sapiens 0 455
ENST00000525153 GEMIN2-004 nonsense_mediated_decay Homo_sapiens 0 612
ENST00000525430 GEMIN2-006 retained_intron Homo_sapiens 0 326
ENST00000527381 GEMIN2-010 protein_coding Homo_sapiens 0 475
ENST00000531684 GEMIN2-011 nonsense_mediated_decay Homo_sapiens 0 592
ENST00000534684 GEMIN2-009 protein_coding Homo_sapiens 0 388
ENST00000572295 GEMIN2P1-001 processed_pseudogene Homo_sapiens 0 455
ENST00000576223 RP11-216N14.10-001 processed_pseudogene Homo_sapiens 0 455

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