C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: CUB and Sushi multiple domains 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000060924 Csmd1 10090 - 8:15892537-17535586 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000082104 Csmd1-001 15892537-17535281 protein_coding
  ENSMUST00000122983 Csmd1-004 17370233-17535377 processed_transcript
  ENSMUST00000125551 Csmd1-002 15892545-15984812 retained_intron
  ENSMUST00000131778 Csmd1-003 16079518-17535281 processed_transcript
  ENSMUST00000133933 Csmd1-005 17214756-17535385 retained_intron
  ENSMUST00000137947 Csmd1-006 16344863-17535586 processed_transcript
  ENSMUST00000138348 Csmd1-007 16288022-17535281 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000082104ENSMUST00000122983ENSMUST00000125551ENSMUST00000131778ENSMUST00000133933ENSMUST00000137947ENSMUST00000138348
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000082104 0.206±0.14 0.130±0.03 0.065±0.03 1.188±0.52 0.231±0.07 0.032±0.01 0.020±0.00 0.119±0.06 0.008±0.01 0.035±0.00 0.011±0.00 1.285±0.44 0.005±0.00 0.091±0.05
ENSMUST00000122983 N/A 0.954±0.00 N/A N/A N/A 0.229±0.07 N/A N/A 0.021±0.01 N/A 0.088±0.00 6.288±1.59 N/A N/A
ENSMUST00000125551 N/A 0.134±0.00 0.087±0.00 1.582±0.00 0.108±0.00 0.050±0.01 N/A 0.128±0.06 0.009±0.01 N/A 0.031±0.01 0.813±0.23 0.023±0.03 0.835±0.62
ENSMUST00000131778 N/A N/A N/A N/A 0.173±0.05 0.033±0.01 N/A N/A 0.004±0.00 0.078±0.00 0.015±0.00 0.682±0.09 0.010±0.00 N/A
ENSMUST00000133933 N/A N/A N/A N/A N/A 0.113±0.00 0.048±0.00 N/A N/A N/A N/A 2.591±0.00 N/A N/A
ENSMUST00000137947 N/A N/A N/A N/A N/A N/A N/A N/A 0.008±0.00 N/A N/A N/A N/A N/A
ENSMUST00000138348 N/A 0.121±0.00 N/A N/A N/A 0.071±0.00 0.134±0.00 0.184±0.00 0.029±0.00 N/A N/A N/A 0.028±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000070 CIL_000070_0003 CGP 8:15057653-17535586
CIL_0000LC CIL_0000LC_0002 CGP 8:15892537-18803189

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001964 IMP startle response
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0016021 IEA integral component of membrane
GO:0042593 IMP glucose homeostasis

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000058353 CSMD1 CUB and Sushi multiple domains 1 protein_coding Danio_rerio
ENSG00000183117 CSMD1 CUB and Sushi multiple domains 1 protein_coding Homo_sapiens

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