C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: CUB and Sushi multiple domains 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000183117 CSMD1 9606 - 8:2935353-4994972 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000335551 CSMD1-006 2935353-3409607 protein_coding
  ENST00000400186 CSMD1-004 2938099-4994701 protein_coding
  ENST00000518151 CSMD1-003 3702147-3708496 processed_transcript
  ENST00000519090 CSMD1-013 3586165-3616739 processed_transcript
  ENST00000519623 CSMD1-009 2999979-3043788 processed_transcript
  ENST00000520002 CSMD1-001 2938099-4994972 protein_coding
  ENST00000520451 CSMD1-012 3151432-3183146 processed_transcript
  ENST00000520561 CSMD1-011 3110213-3113363 processed_transcript
  ENST00000520630 CSMD1-002 3468712-3515359 processed_transcript
  ENST00000521646 CSMD1-014 3278364-3284346 processed_transcript
  ENST00000523062 CSMD1-010 3096902-3107155 retained_intron
  ENST00000523387 CSMD1-007 3127386-3284654 processed_transcript
  ENST00000523488 CSMD1-008 3151247-3396319 retained_intron
  ENST00000524177 CSMD1-015 3468712-3469200 processed_transcript
  ENST00000537824 CSMD1-201 2935354-4032100 protein_coding
  ENST00000602557 CSMD1-017 2938099-4994972 protein_coding
  ENST00000602723 CSMD1-018 2938099-4994701 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartLiverLungMuscleOvaryENST00000335551ENST00000400186ENST00000519623ENST00000520002ENST00000520630ENST00000521646ENST00000523387ENST00000523488ENST00000537824ENST00000602557ENST00000602723
Transcript ID Adipose Adrenal Brain Breast Colon Heart Liver Lung Muscle Ovary
ENST00000335551 0.025±0.00 0.009±0.00 0.497±0.00 0.073±0.00 N/A 0.014±0.00 0.072±0.00 N/A N/A 0.020±0.00
ENST00000400186 N/A N/A N/A N/A N/A N/A N/A N/A 0.010±0.00 N/A
ENST00000519623 N/A N/A N/A 0.569±0.00 N/A N/A N/A N/A N/A 0.080±0.00
ENST00000520002 N/A N/A 0.552±0.00 N/A N/A 0.004±0.00 N/A N/A N/A N/A
ENST00000520630 N/A N/A N/A N/A 1.085±0.00 N/A N/A N/A N/A N/A
ENST00000521646 0.200±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000523387 N/A 0.034±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000523488 N/A N/A N/A N/A N/A N/A N/A 0.107±0.00 N/A N/A
ENST00000537824 N/A N/A 1.235±0.63 N/A 0.014±0.00 N/A N/A N/A N/A N/A
ENST00000602557 N/A N/A 0.552±0.00 N/A N/A 0.004±0.00 N/A N/A N/A N/A
ENST00000602723 N/A N/A N/A N/A N/A N/A N/A N/A 0.010±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000070 CIL_000070_0002 CGP 8:2045040-4994972
CIL_0000LC CIL_0000LC_0001 CGP 8:2935353-6643623

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001964 IEA startle response
GO:0042593 IEA glucose homeostasis

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000058353 CSMD1 CUB and Sushi multiple domains 1 protein_coding Danio_rerio
ENSMUSG00000060924 Csmd1 CUB and Sushi multiple domains 1 protein_coding Mus_musculus

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