C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: CUB and Sushi multiple domains 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000131778 Csmd1-003 ENSMUSG00000060924 10090 - 8:16079518-17535281 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastColonLiverLungMuscleOvaryPlacentaENSMUST00000131778
Transcript ID Breast Colon Liver Lung Muscle Ovary Placenta
ENSMUST00000131778 0.173±0.05 0.033±0.01 0.004±0.00 0.078±0.00 0.015±0.00 0.682±0.09 0.010±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000070 CIL_000070_0003 CGP 8:15057653-17535586
CIL_0000LC CIL_0000LC_0002 CGP 8:15892537-18803189

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000006458 protein_coding Danio_rerio 0 252
ENSDART00000148564 protein_coding Danio_rerio 0 252
ENST00000297405 CSMD3-001 protein_coding Homo_sapiens 0 309
ENST00000335551 CSMD1-006 protein_coding Homo_sapiens 0 3744
ENST00000339701 CSMD3-007 protein_coding Homo_sapiens 0 309
ENST00000343508 CSMD3-006 protein_coding Homo_sapiens 0 309
ENST00000400186 CSMD1-004 protein_coding Homo_sapiens 0 5483
ENST00000455883 CSMD3-002 protein_coding Homo_sapiens 0 340
ENST00000520002 CSMD1-001 protein_coding Homo_sapiens 0 5491
ENST00000521646 CSMD1-014 processed_transcript Homo_sapiens 0 254
ENST00000523387 CSMD1-007 processed_transcript Homo_sapiens 0 1251
ENST00000523488 CSMD1-008 retained_intron Homo_sapiens 0 2832
ENST00000537824 CSMD1-201 protein_coding Homo_sapiens 0 4966
ENST00000602557 CSMD1-017 protein_coding Homo_sapiens 0 5491
ENST00000602723 CSMD1-018 protein_coding Homo_sapiens 0 5483

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