C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_000070_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000090514-ENSDARG00000058353 CGP 7955 Zv9_scaffold3535:22212-231794
GeneTranscriptPositionBiotype
ENSDARG00000058353 (CSMD1)
CUB and Sushi multiple domains 1 		ENSDART00000059170 (CSMD1-201) 176397-231794 protein_coding
ENSDART00000097148 (CSMD1-202) 176397-194510 protein_coding
ENSDARG00000090514 (MYOM2 (3 of 3))
myomesin 2 		ENSDART00000130478 (MYOM2 (3 of 3)-201) 22212-40366 protein_coding
CIL_000070_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000036448-ENSG00000183117 CGP 9606 8:2045040-4994972
GeneTranscriptPositionBiotype
ENSG00000036448 (MYOM2)
myomesin 2 		ENST00000262113 (MYOM2-001) 2045040-2145456 protein_coding
ENST00000517520 (MYOM2-011) 2102003-2106516 processed_transcript
ENST00000518203 (MYOM2-010) 2100444-2106551 processed_transcript
ENST00000518513 (MYOM2-013) 2143349-2144766 retained_intron
ENST00000518803 (MYOM2-016) 2085000-2094025 processed_transcript
ENST00000519372 (MYOM2-009) 2098045-2106298 processed_transcript
ENST00000519518 (MYOM2-008) 2081788-2090064 processed_transcript
ENST00000519631 (MYOM2-004) 2119258-2140826 processed_transcript
ENST00000520072 (MYOM2-003) 2118865-2140818 processed_transcript
ENST00000520298 (MYOM2-014) 2140743-2145438 processed_transcript
ENST00000520779 (MYOM2-006) 2140849-2165552 processed_transcript
ENST00000523438 (MYOM2-002) 2045069-2145455 protein_coding
ENST00000523443 (MYOM2-012) 2109287-2129175 retained_intron
ENST00000612167 (MYOM2-015) 2127735-2144910 processed_transcript
ENST00000621894 (MYOM2-005) 2127797-2144843 processed_transcript
ENSG00000183117 (CSMD1)
CUB and Sushi multiple domains 1 		ENST00000335551 (CSMD1-006) 2935353-3409607 protein_coding
ENST00000400186 (CSMD1-004) 2938099-4994701 protein_coding
ENST00000518151 (CSMD1-003) 3702147-3708496 processed_transcript
ENST00000519090 (CSMD1-013) 3586165-3616739 processed_transcript
ENST00000519623 (CSMD1-009) 2999979-3043788 processed_transcript
ENST00000520002 (CSMD1-001) 2938099-4994972 protein_coding
ENST00000520451 (CSMD1-012) 3151432-3183146 processed_transcript
ENST00000520561 (CSMD1-011) 3110213-3113363 processed_transcript
ENST00000520630 (CSMD1-002) 3468712-3515359 processed_transcript
ENST00000521646 (CSMD1-014) 3278364-3284346 processed_transcript
ENST00000523062 (CSMD1-010) 3096902-3107155 retained_intron
ENST00000523387 (CSMD1-007) 3127386-3284654 processed_transcript
ENST00000523488 (CSMD1-008) 3151247-3396319 retained_intron
ENST00000524177 (CSMD1-015) 3468712-3469200 processed_transcript
ENST00000537824 (CSMD1-201) 2935354-4032100 protein_coding
ENST00000602557 (CSMD1-017) 2938099-4994972 protein_coding
ENST00000602723 (CSMD1-018) 2938099-4994701 protein_coding
ENSG00000253444 (AC133633.2)
 ENST00000522799 (AC133633.2-001) 2493876-2512580 lincRNA
ENSG00000253853 (GS1-57L11.1)
 ENST00000520024 (GS1-57L11.1-001) 2727318-2822482 lincRNA
ENSG00000253855 (AC133633.1)
 ENST00000520162 (AC133633.1-001) 2518998-2522182 lincRNA
ENSG00000254244 (PAICSP4)
phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoimidazole succinocarboxamide synthetase pseudogene 4 		ENST00000517543 (PAICSP4-001) 4787332-4788584 processed_pseudogene
ENSG00000254319 (RP11-134O21.1)
 ENST00000517357 (RP11-134O21.1-005) 2669802-2728419 lincRNA
ENST00000517984 (RP11-134O21.1-001) 2669829-2728419 lincRNA
ENST00000519393 (RP11-134O21.1-006) 2666102-2728389 lincRNA
ENST00000520570 (RP11-134O21.1-003) 2701473-2728417 lincRNA
ENST00000520842 (RP11-134O21.1-002) 2696554-2728417 lincRNA
ENST00000523971 (RP11-134O21.1-004) 2666079-2728451 lincRNA
ENSG00000277526 (RP11-378A12.1)
 ENST00000612422 (RP11-378A12.1-002) 2589985-2623382 lincRNA
ENST00000618928 (RP11-378A12.1-001) 2589985-2623365 lincRNA
CIL_000070_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000031461-ENSMUSG00000060924 CGP 10090 8:15057653-17535586
GeneTranscriptPositionBiotype
ENSMUSG00000031461 (Myom2)
myomesin 2 		ENSMUST00000033842 (Myom2-001) 15057653-15133541 protein_coding
ENSMUST00000131251 (Myom2-002) 15060190-15073840 retained_intron
ENSMUST00000135393 (Myom2-004) 15106025-15108840 retained_intron
ENSMUST00000135908 (Myom2-005) 15058975-15063965 processed_transcript
ENSMUST00000140033 (Myom2-003) 15119007-15131160 processed_transcript
ENSMUSG00000060924 (Csmd1)
CUB and Sushi multiple domains 1 		ENSMUST00000082104 (Csmd1-001) 15892537-17535281 protein_coding
ENSMUST00000122983 (Csmd1-004) 17370233-17535377 processed_transcript
ENSMUST00000125551 (Csmd1-002) 15892545-15984812 retained_intron
ENSMUST00000131778 (Csmd1-003) 16079518-17535281 processed_transcript
ENSMUST00000133933 (Csmd1-005) 17214756-17535385 retained_intron
ENSMUST00000137947 (Csmd1-006) 16344863-17535586 processed_transcript
ENSMUST00000138348 (Csmd1-007) 16288022-17535281 retained_intron
ENSMUSG00000083000 (Gm15678)
predicted gene 15678 		ENSMUST00000117573 (Gm15678-001) 15100329-15101350 processed_pseudogene
ENSMUSG00000085150 (Gm16346)
predicted gene 16346 		ENSMUST00000129158 (Gm16346-001) 16226003-16232305 antisense
ENSMUSG00000087363 (Gm16347)
predicted gene 16347 		ENSMUST00000131707 (Gm16347-001) 16433186-16437040 antisense
ENSMUST00000149000 (Gm16347-002) 16433175-16435903 antisense
ENSMUSG00000087892 (Gm25278)
predicted gene, 25278 		ENSMUST00000157267 (Gm25278-201) 16852168-16852287 snoRNA
ENSMUSG00000094971 (Gm25255)
predicted gene, 25255 		ENSMUST00000179579 (Gm25255-201) 15418536-15418645 miRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000070_0001ENSDARG00000058353ENSDART00000059170ENSDART00000097148ENSDARG00000090514ENSDART00000130478CIL_000070_0002ENSG00000036448ENST00000262113ENST00000517520ENST00000518203ENST00000518513ENST00000518803ENST00000519372ENST00000519518ENST00000519631ENST00000520072ENST00000520298ENST00000520779ENST00000523438ENST00000523443ENST00000612167ENST00000621894ENSG00000183117ENST00000335551ENST00000400186ENST00000518151ENST00000519090ENST00000519623ENST00000520002ENST00000520451ENST00000520561ENST00000520630ENST00000521646ENST00000523062ENST00000523387ENST00000523488ENST00000524177ENST00000537824ENST00000602557ENST00000602723ENSG00000253444ENST00000522799ENSG00000253853ENST00000520024ENSG00000253855ENST00000520162ENSG00000254244ENST00000517543ENSG00000254319ENST00000517357ENST00000517984ENST00000519393ENST00000520570ENST00000520842ENST00000523971ENSG00000277526ENST00000612422ENST00000618928CIL_000070_0003ENSMUSG00000031461ENSMUST00000033842ENSMUST00000131251ENSMUST00000135393ENSMUST00000135908ENSMUST00000140033ENSMUSG00000060924ENSMUST00000082104ENSMUST00000122983ENSMUST00000125551ENSMUST00000131778ENSMUST00000133933ENSMUST00000137947ENSMUST00000138348ENSMUSG00000083000ENSMUST00000117573ENSMUSG00000085150ENSMUST00000129158ENSMUSG00000087363ENSMUST00000131707ENSMUST00000149000ENSMUSG00000087892ENSMUST00000157267ENSMUSG00000094971ENSMUST00000179579
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000070_0001ENSDARG00000058353ENSDART00000059170ENSDART00000097148ENSDARG00000090514ENSDART00000130478CIL_000070_0002ENSG00000036448ENST00000262113ENST00000519631ENST00000520298ENST00000523438ENST00000523443ENST00000612167ENST00000621894ENSG00000183117ENST00000335551ENST00000400186ENST00000519623ENST00000520002ENST00000520630ENST00000521646ENST00000523387ENST00000523488ENST00000537824ENST00000602557ENST00000602723ENSG00000253444ENST00000522799ENSG00000253853ENST00000520024ENSG00000253855ENST00000520162ENSG00000254244ENST00000517543ENSG00000254319ENST00000517357ENST00000517984ENST00000519393ENST00000520570ENST00000520842ENST00000523971ENSG00000277526ENST00000612422ENST00000618928CIL_000070_0003ENSMUSG00000031461ENSMUST00000033842ENSMUST00000131251ENSMUST00000135393ENSMUST00000140033ENSMUSG00000060924ENSMUST00000082104ENSMUST00000122983ENSMUST00000125551ENSMUST00000131778ENSMUST00000133933ENSMUST00000137947ENSMUST00000138348ENSMUSG00000083000ENSMUST00000117573ENSMUSG00000085150ENSMUST00000129158ENSMUSG00000087363ENSMUST00000131707ENSMUSG00000087892ENSMUST00000157267ENSMUSG00000094971ENSMUST00000179579
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000058353 ENSDART00000059170 N/A N/A N/A N/A N/A N/A 0.024±0.00 0.065±0.00 N/A N/A N/A N/A N/A N/A
ENSDART00000097148 N/A N/A N/A 1.590±0.00 N/A N/A 0.097±0.01 N/A N/A N/A 0.197±0.00 N/A N/A N/A
ENSDARG00000090514 ENSDART00000130478 N/A N/A N/A 0.802±0.03 N/A N/A 7.360±2.83 3.701±0.00 0.205±0.00 N/A 312.743±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000036448 ENST00000262113 N/A 0.245±0.00 0.319±0.00 0.831±0.00 2.215±1.89 0.180±0.11 174.395±133.92 0.553±0.00 0.090±0.00 0.556±0.25 34.213±0.00 0.166±0.00 0.328±0.24 2.176±0.00
ENST00000517520 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000518203 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000518513 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000518803 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000519372 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000519518 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000519631 N/A N/A N/A N/A N/A 0.422±0.28 N/A 0.397±0.00 N/A N/A N/A N/A N/A N/A
ENST00000520072 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000520298 N/A 1.563±0.00 N/A 4.005±0.00 10.503±0.00 0.488±0.35 N/A 2.756±0.00 1.529±0.00 N/A N/A 0.885±0.61 1.311±0.09 11.726±6.50
ENST00000520779 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000523438 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.070±0.00 N/A N/A
ENST00000523443 N/A N/A N/A 1.587±0.00 N/A 0.308±0.00 N/A N/A N/A 1.049±0.00 N/A N/A N/A N/A
ENST00000612167 N/A 0.667±0.00 N/A N/A N/A 0.735±0.00 N/A 0.452±0.00 N/A N/A N/A 0.951±0.43 N/A 11.183±0.80
ENST00000621894 N/A N/A N/A N/A N/A N/A N/A N/A 1.058±0.00 N/A N/A N/A N/A N/A
ENSG00000183117 ENST00000335551 0.025±0.00 0.009±0.00 N/A 0.497±0.00 0.073±0.00 N/A 0.014±0.00 N/A 0.072±0.00 N/A N/A 0.020±0.00 N/A N/A
ENST00000400186 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.010±0.00 N/A N/A N/A
ENST00000518151 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000519090 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000519623 N/A N/A N/A N/A 0.569±0.00 N/A N/A N/A N/A N/A N/A 0.080±0.00 N/A N/A
ENST00000520002 N/A N/A N/A 0.552±0.00 N/A N/A 0.004±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000520451 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000520561 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000520630 N/A N/A N/A N/A N/A 1.085±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000521646 0.200±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000523062 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000523387 N/A 0.034±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000523488 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.107±0.00 N/A N/A N/A N/A
ENST00000524177 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000537824 N/A N/A N/A 1.235±0.63 N/A 0.014±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000602557 N/A N/A N/A 0.552±0.00 N/A N/A 0.004±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000602723 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.010±0.00 N/A N/A N/A
ENSG00000253444 ENST00000522799 N/A N/A 0.171±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000253853 ENST00000520024 0.144±0.00 0.303±0.00 0.797±0.00 0.748±0.56 0.390±0.07 0.231±0.06 0.114±0.00 0.076±0.00 2.051±0.00 2.635±2.61 N/A 0.157±0.08 N/A 0.278±0.01
ENSG00000253855 ENST00000520162 N/A N/A 0.452±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.059±0.00
ENSG00000254244 ENST00000517543 N/A N/A N/A 0.893±0.00 N/A N/A 0.041±0.00 N/A N/A N/A 0.016±0.00 0.034±0.00 0.017±0.00 0.102±0.00
ENSG00000254319 ENST00000517357 N/A 0.100±0.00 N/A 0.085±0.00 0.098±0.00 N/A 0.106±0.00 0.314±0.00 N/A 0.331±0.00 N/A 0.057±0.00 N/A N/A
ENST00000517984 N/A N/A 0.267±0.00 1.610±0.00 N/A 0.337±0.00 N/A N/A N/A N/A N/A 0.098±0.01 N/A N/A
ENST00000519393 N/A N/A 0.152±0.00 N/A 0.220±0.00 N/A N/A N/A N/A N/A N/A 0.081±0.00 N/A N/A
ENST00000520570 N/A N/A N/A N/A 0.261±0.00 0.227±0.17 N/A N/A 0.540±0.00 N/A N/A N/A N/A 0.405±0.00
ENST00000520842 0.050±0.00 0.025±0.00 N/A N/A N/A N/A N/A 0.222±0.00 N/A N/A N/A 0.074±0.00 N/A 0.210±0.00
ENST00000523971 0.382±0.00 0.055±0.00 0.632±0.00 N/A 0.050±0.00 N/A N/A N/A N/A N/A N/A 0.240±0.09 N/A 0.233±0.00
ENSG00000277526 ENST00000612422 0.003±0.00 0.003±0.00 N/A 0.019±0.00 N/A 0.013±0.00 0.003±0.00 N/A 0.028±0.00 N/A N/A N/A N/A 0.212±0.05
ENST00000618928 0.003±0.00 0.003±0.00 N/A 0.019±0.00 N/A 0.013±0.00 0.003±0.00 N/A 0.142±0.00 N/A N/A 0.015±0.00 N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000031461 ENSMUST00000033842 0.034±0.02 N/A 0.062±0.00 0.043±0.01 15.945±16.00 0.232±0.06 153.173±10.97 3.012±0.69 0.087±0.09 4.242±2.43 258.990±15.45 0.154±0.10 0.088±0.05 0.442±0.06
ENSMUST00000131251 0.038±0.02 0.036±0.02 N/A 0.029±0.01 0.034±0.01 0.031±0.00 N/A N/A 0.024±0.01 N/A N/A 0.067±0.04 0.047±0.01 N/A
ENSMUST00000135393 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.147±0.00 N/A N/A
ENSMUST00000135908 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000140033 0.041±0.01 N/A N/A N/A N/A N/A N/A N/A 0.048±0.00 N/A N/A 0.272±0.11 N/A N/A
ENSMUSG00000060924 ENSMUST00000082104 0.206±0.14 0.130±0.03 0.065±0.03 1.188±0.52 0.231±0.07 0.032±0.01 0.020±0.00 0.119±0.06 0.008±0.01 0.035±0.00 0.011±0.00 1.285±0.44 0.005±0.00 0.091±0.05
ENSMUST00000122983 N/A 0.954±0.00 N/A N/A N/A 0.229±0.07 N/A N/A 0.021±0.01 N/A 0.088±0.00 6.288±1.59 N/A N/A
ENSMUST00000125551 N/A 0.134±0.00 0.087±0.00 1.582±0.00 0.108±0.00 0.050±0.01 N/A 0.128±0.06 0.009±0.01 N/A 0.031±0.01 0.813±0.23 0.023±0.03 0.835±0.62
ENSMUST00000131778 N/A N/A N/A N/A 0.173±0.05 0.033±0.01 N/A N/A 0.004±0.00 0.078±0.00 0.015±0.00 0.682±0.09 0.010±0.00 N/A
ENSMUST00000133933 N/A N/A N/A N/A N/A 0.113±0.00 0.048±0.00 N/A N/A N/A N/A 2.591±0.00 N/A N/A
ENSMUST00000137947 N/A N/A N/A N/A N/A N/A N/A N/A 0.008±0.00 N/A N/A N/A N/A N/A
ENSMUST00000138348 N/A 0.121±0.00 N/A N/A N/A 0.071±0.00 0.134±0.00 0.184±0.00 0.029±0.00 N/A N/A N/A 0.028±0.00 N/A
ENSMUSG00000083000 ENSMUST00000117573 N/A N/A N/A N/A N/A N/A 0.507±0.14 0.104±0.06 N/A 0.077±0.00 0.063±0.02 N/A N/A N/A
ENSMUSG00000085150 ENSMUST00000129158 N/A N/A 0.009±0.00 0.019±0.01 N/A N/A N/A N/A N/A N/A N/A 0.436±0.00 N/A N/A
ENSMUSG00000087363 ENSMUST00000131707 0.264±0.17 N/A N/A 0.058±0.00 0.131±0.04 N/A N/A N/A N/A N/A N/A 0.069±0.00 N/A 7.464±2.76
ENSMUST00000149000 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000087892 ENSMUST00000157267 N/A N/A N/A 9.429±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 19.528±0.00
ENSMUSG00000094971 ENSMUST00000179579 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 125.165±0.00 N/A

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