C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ribosomal protein L35
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000062997 Rpl35 10090 - 2:39001580-39005624 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000080861 Rpl35-001 39001580-39005624 protein_coding
  ENSMUST00000126246 Rpl35-002 39004612-39005122 processed_transcript
  ENSMUST00000152441 Rpl35-003 39001619-39005043 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000080861ENSMUST00000126246ENSMUST00000152441
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000080861 85.797±27.63 23.843±5.10 302.210±22.75 181.402±4.64 48.400±20.46 70.585±26.73 43.946±8.99 67.602±25.34 188.135±180.22 65.630±1.99 53.456±11.32 72.611±27.49 184.228±102.86 84.479±39.12
ENSMUST00000126246 N/A N/A N/A 265.015±0.00 26.149±0.00 321.618±7.99 N/A 199.054±0.00 60.762±11.26 N/A N/A 630.882±238.22 798.427±34.79 140.984±0.00
ENSMUST00000152441 N/A 19.264±9.67 N/A 52.504±0.00 8.078±0.00 N/A N/A N/A N/A N/A N/A 822.976±440.10 434.792±314.67 43.298±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00075G CIL_00075G_0002 CGP 2:38931978-39006168
CIL_00075H CIL_00075H_0002 CGP 2:38997476-39006168
CIL_00075E CIL_00075E_0002 CGP 2:39001580-39015877

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003735 IEA structural constituent of ribosome
GO:0005840 IEA ribosome
GO:0006412 IEA translation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000018334 rpl35 ribosomal protein L35 protein_coding Danio_rerio
ENSG00000136942 RPL35 ribosomal protein L35 protein_coding Homo_sapiens

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