C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein L35
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000152441 Rpl35-003 ENSMUSG00000062997 10090 - 2:39001619-39005043 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastOvaryPlacentaTestisENSMUST00000152441
Transcript ID Adrenal Brain Breast Ovary Placenta Testis
ENSMUST00000152441 19.264±9.67 52.504±0.00 8.078±0.00 822.976±440.10 434.792±314.67 43.298±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00075G CIL_00075G_0002 CGP 2:38931978-39006168
CIL_00075H CIL_00075H_0002 CGP 2:38997476-39006168
CIL_00075E CIL_00075E_0002 CGP 2:39001580-39015877

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000348462 RPL35-001 protein_coding Homo_sapiens 0 457
ENST00000373570 RPL35-005 protein_coding Homo_sapiens 0 265
ENST00000402419 RPL35P2-001 processed_pseudogene Homo_sapiens 0 414
ENST00000403133 RPL35P3-001 processed_pseudogene Homo_sapiens 0 305
ENST00000433284 RPL35P8-001 processed_pseudogene Homo_sapiens 0 248
ENST00000433398 RPL35P5-001 processed_pseudogene Homo_sapiens 0 409
ENST00000450819 RPL35P1-001 processed_pseudogene Homo_sapiens 0 390
ENST00000487431 RPL35-004 retained_intron Homo_sapiens 0 462
ENST00000493018 RPL35-003 nonsense_mediated_decay Homo_sapiens 0 265

Loading