C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ADAMTS-like 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000066113 Adamtsl1 10090 + 4:86053915-86428385 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000048885 Adamtsl1-002 86053923-86252973 protein_coding
  ENSMUST00000107177 Adamtsl1-005 86276766-86428382 retained_intron
  ENSMUST00000107178 Adamtsl1-201 86053915-86428382 protein_coding
  ENSMUST00000120678 Adamtsl1-003 86053975-86199695 protein_coding
  ENSMUST00000126654 Adamtsl1-007 86087799-86111316 retained_intron
  ENSMUST00000130474 Adamtsl1-009 86053915-86087961 retained_intron
  ENSMUST00000136320 Adamtsl1-008 86199317-86248129 protein_coding
  ENSMUST00000136418 Adamtsl1-006 86276489-86277102 processed_transcript
  ENSMUST00000141889 Adamtsl1-001 86053928-86428385 protein_coding
  ENSMUST00000150043 Adamtsl1-004 86054020-86234431 retained_intron

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000048885ENSMUST00000107177ENSMUST00000107178ENSMUST00000120678ENSMUST00000136320ENSMUST00000136418ENSMUST00000141889
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000048885 0.863±0.00 N/A N/A N/A N/A N/A 0.290±0.00 N/A 0.080±0.01 N/A N/A N/A N/A N/A
ENSMUST00000107177 1.697±1.84 1.311±0.48 5.837±0.02 0.548±0.07 0.955±0.18 0.829±0.18 0.371±0.14 0.209±0.02 0.078±0.02 1.622±0.00 0.171±0.04 2.034±0.68 0.239±0.15 0.443±0.26
ENSMUST00000107178 1.201±0.99 0.383±0.11 2.508±0.28 0.342±0.01 0.801±0.16 N/A 0.164±0.07 0.694±0.25 0.031±0.01 0.620±0.13 0.223±0.08 1.223±0.86 0.204±0.03 0.299±0.08
ENSMUST00000120678 N/A N/A N/A N/A N/A N/A N/A N/A 0.180±0.08 N/A N/A N/A 0.158±0.07 N/A
ENSMUST00000136320 N/A N/A N/A N/A N/A N/A N/A N/A 0.235±0.00 N/A N/A N/A N/A N/A
ENSMUST00000136418 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.333±0.00 N/A
ENSMUST00000141889 N/A 0.802±0.21 2.750±0.18 N/A N/A 0.416±0.00 N/A 0.306±0.00 0.090±0.04 0.685±0.00 0.128±0.08 N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00013Y CIL_00013Y_0002 CGP 4:85205126-86428385
CIL_0007DA CIL_0007DA_0002 CGP 4:86053915-86558328

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0005578 IEA proteinaceous extracellular matrix
GO:0006508 IEA proteolysis
GO:0008150 ND biological_process
GO:0008237 IEA metallopeptidase activity
GO:0008270 IEA zinc ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000178031 ADAMTSL1 ADAMTS-like 1 protein_coding Homo_sapiens

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