C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ADAMTS-like 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000141889 Adamtsl1-001 ENSMUSG00000066113 10090 + 4:86053928-86428385 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderColonKidneyLiverLungMuscleENSMUST00000141889
Transcript ID Adrenal Bladder Colon Kidney Liver Lung Muscle
ENSMUST00000141889 0.802±0.21 2.750±0.18 0.416±0.00 0.306±0.00 0.090±0.04 0.685±0.00 0.128±0.08

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00013Y CIL_00013Y_0002 CGP 4:85205126-86428385
CIL_0007DA CIL_0007DA_0002 CGP 4:86053915-86558328

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0005578 IEA proteinaceous extracellular matrix
GO:0006508 IEA proteolysis
GO:0008150 ND biological_process
GO:0008237 IEA metallopeptidase activity
GO:0008270 IEA zinc ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000276935 ADAMTSL1-005 protein_coding Homo_sapiens 0 2481
ENST00000327883 ADAMTSL1-001 protein_coding Homo_sapiens 0 2178
ENST00000380538 ADAMTSL1-014 protein_coding Homo_sapiens 0 422
ENST00000380545 ADAMTSL1-011 protein_coding Homo_sapiens 0 1561
ENST00000380548 ADAMTSL1-012 protein_coding Homo_sapiens 0 3384
ENST00000380559 ADAMTSL1-010 retained_intron Homo_sapiens 0 3384
ENST00000380566 ADAMTSL1-002 protein_coding Homo_sapiens 0 1380
ENST00000380570 ADAMTSL1-003 protein_coding Homo_sapiens 0 857
ENST00000388710 ADAMTSL1-009 nonsense_mediated_decay Homo_sapiens 0 649
ENST00000431052 ADAMTSL1-004 protein_coding Homo_sapiens 0 704
ENST00000489062 ADAMTSL1-007 retained_intron Homo_sapiens 0 453
ENST00000496521 ADAMTSL1-006 processed_transcript Homo_sapiens 0 217
ENST00000542621 ADAMTSL1-008 nonsense_mediated_decay Homo_sapiens 0 704
ENST00000546040 ADAMTSL1-013 retained_intron Homo_sapiens 0 627

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