C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ADAMTS-like 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000120678 Adamtsl1-003 ENSMUSG00000066113 10090 + 4:86053975-86199695 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; LiverPlacentaENSMUST00000120678
Transcript ID Liver Placenta
ENSMUST00000120678 0.180±0.08 0.158±0.07

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00013Y CIL_00013Y_0002 CGP 4:85205126-86428385
CIL_0007DA CIL_0007DA_0002 CGP 4:86053915-86558328

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0005578 IEA proteinaceous extracellular matrix
GO:0006508 IEA proteolysis
GO:0008150 ND biological_process
GO:0008237 IEA metallopeptidase activity
GO:0008270 IEA zinc ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000276935 ADAMTSL1-005 protein_coding Homo_sapiens 0 745
ENST00000327883 ADAMTSL1-001 protein_coding Homo_sapiens 0 856
ENST00000380548 ADAMTSL1-012 protein_coding Homo_sapiens 0 856
ENST00000380566 ADAMTSL1-002 protein_coding Homo_sapiens 0 841
ENST00000380570 ADAMTSL1-003 protein_coding Homo_sapiens 0 872
ENST00000431052 ADAMTSL1-004 protein_coding Homo_sapiens 0 699

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