C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ADAMTS-like 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000178031 ADAMTSL1 9606 + 9:18473894-18910950 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000276935 ADAMTSL1-005 18474233-18723917 protein_coding
  ENST00000327883 ADAMTSL1-001 18474100-18684957 protein_coding
  ENST00000380538 ADAMTSL1-014 18829923-18890790 protein_coding
  ENST00000380545 ADAMTSL1-011 18826138-18908609 protein_coding
  ENST00000380548 ADAMTSL1-012 18473894-18910950 protein_coding
  ENST00000380559 ADAMTSL1-010 18706641-18910947 retained_intron
  ENST00000380566 ADAMTSL1-002 18474169-18681483 protein_coding
  ENST00000380570 ADAMTSL1-003 18474153-18622619 protein_coding
  ENST00000388710 ADAMTSL1-009 18826148-18908609 nonsense_mediated_decay
  ENST00000431052 ADAMTSL1-004 18474144-18574527 protein_coding
  ENST00000489062 ADAMTSL1-007 18905491-18910947 retained_intron
  ENST00000496521 ADAMTSL1-006 18793225-18796762 processed_transcript
  ENST00000542621 ADAMTSL1-008 18826138-18910294 nonsense_mediated_decay
  ENST00000546040 ADAMTSL1-013 18657615-18684957 retained_intron

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000276935ENST00000327883ENST00000380548ENST00000380559ENST00000380566ENST00000380570ENST00000388710ENST00000431052ENST00000489062ENST00000542621ENST00000546040
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000276935 N/A N/A 0.233±0.00 N/A N/A N/A N/A N/A N/A 0.520±0.00 N/A N/A N/A N/A
ENST00000327883 N/A N/A N/A N/A 1.778±0.00 N/A N/A N/A N/A N/A N/A 0.395±0.00 0.086±0.00 N/A
ENST00000380548 0.609±0.00 N/A N/A 0.070±0.00 0.161±0.00 0.658±0.00 N/A 0.688±0.00 0.080±0.06 0.183±0.08 N/A 0.231±0.11 N/A N/A
ENST00000380559 0.318±0.00 0.522±0.00 N/A 0.047±0.00 0.266±0.00 0.860±0.00 0.040±0.00 N/A 0.108±0.08 0.402±0.33 N/A 0.667±0.02 0.135±0.01 0.996±0.00
ENST00000380566 N/A N/A 0.319±0.00 N/A 0.655±0.00 0.733±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000380570 N/A N/A N/A N/A N/A N/A 0.664±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000388710 N/A N/A N/A N/A N/A N/A 0.257±0.00 N/A N/A N/A N/A N/A 0.263±0.00 N/A
ENST00000431052 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.560±0.00 N/A N/A N/A N/A
ENST00000489062 N/A N/A N/A N/A N/A 0.529±0.00 N/A N/A N/A N/A 0.067±0.00 0.052±0.00 N/A N/A
ENST00000542621 N/A 0.934±0.00 N/A 0.162±0.01 N/A N/A 0.194±0.00 0.615±0.00 0.449±0.25 N/A 0.094±0.00 N/A N/A 0.850±0.00
ENST00000546040 N/A N/A N/A N/A 0.445±0.00 N/A 0.338±0.00 N/A N/A N/A N/A 0.665±0.00 0.159±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00013Y CIL_00013Y_0001 CGP 9:17579082-18910950
CIL_0007DA CIL_0007DA_0001 CGP 9:18473894-19049354

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004222 IEA metalloendopeptidase activity
GO:0005515 IEA protein binding
GO:0005578 IEA proteinaceous extracellular matrix
GO:0006508 IEA proteolysis
GO:0008233 IEA peptidase activity
GO:0008237 IEA metallopeptidase activity
GO:0008270 IEA zinc ion binding
GO:0031012 IEA extracellular matrix

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSMUSG00000066113 Adamtsl1 ADAMTS-like 1 protein_coding Mus_musculus

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