C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: hairy and enhancer of split 6
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000126136 Hes6-005 ENSMUSG00000067071 10090 - 1:91411483-91413222 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000126136
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000126136 5.208±1.21 40.275±5.17 4.536±1.31 19.056±16.63 8.179±3.26 21.179±1.82 2.095±0.71 4.839±0.44 5.552±1.75 8.734±1.44 1.054±0.35 7.238±1.81 1.628±0.63 0.622±0.26

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008D3 CIL_0008D3_0002 VISTA 1:90908179-91512308
CIL_0006X3 CIL_0006X3_0002 CGP 1:91373861-91414038
CIL_0004KS CIL_0004KS_0003 CGP 1:91411483-91459324

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000019035 her8a-201 protein_coding Danio_rerio 0.000002 58
ENSDART00000123395 her8a-001 protein_coding Danio_rerio 0.000002 58
ENST00000272937 HES6-001 protein_coding Homo_sapiens 0 379
ENST00000409002 HES6-002 protein_coding Homo_sapiens 0 379
ENST00000409160 HES6-003 protein_coding Homo_sapiens 0 745
ENST00000409182 HES6-006 protein_coding Homo_sapiens 0 379
ENST00000409356 HES6-007 protein_coding Homo_sapiens 0 224
ENST00000409574 HES6-005 protein_coding Homo_sapiens 0 359
ENST00000436051 HES6-004 protein_coding Homo_sapiens 0 220

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