C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: histocompatibility 2, M region locus 9
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000067201 H2-M9 10090 - 17:36639285-36642666 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000087165 H2-M9-002 36639285-36642666 protein_coding
  ENSMUST00000087167 H2-M9-001 36640406-36642666 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBreastHeartKidneyLungMuscleOvaryPlacentaTestisENSMUST00000087165ENSMUST00000087167
Transcript ID Adipose Bladder Breast Heart Kidney Lung Muscle Ovary Placenta Testis
ENSMUST00000087165 0.343±0.13 N/A 0.795±0.48 0.127±0.06 N/A 0.171±0.03 0.048±0.02 0.150±0.01 0.025±0.01 0.011±0.00
ENSMUST00000087167 0.438±0.43 0.058±0.00 N/A N/A 0.041±0.00 N/A 0.057±0.01 0.175±0.00 0.008±0.01 0.037±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000420 CIL_000420_0004 CGP 17:36547075-36642666
CIL_000420 CIL_000420_0005 CGP 17:36639285-36672219

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001916 IEA positive regulation of T cell mediated cytotoxicity
GO:0002474 IEA antigen processing and presentation of peptide antigen via MHC class I
GO:0006955 IEA immune response
GO:0016021 IEA integral component of membrane
GO:0042605 IEA peptide antigen binding
GO:0042612 IEA MHC class I protein complex

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000204525 HLA-C major histocompatibility complex, class I, C protein_coding Homo_sapiens
ENSG00000204592 HLA-E major histocompatibility complex, class I, E protein_coding Homo_sapiens
ENSG00000204632 HLA-G major histocompatibility complex, class I, G protein_coding Homo_sapiens
ENSG00000204642 HLA-F major histocompatibility complex, class I, F protein_coding Homo_sapiens
ENSG00000206503 HLA-A major histocompatibility complex, class I, A protein_coding Homo_sapiens
ENSG00000234745 HLA-B major histocompatibility complex, class I, B protein_coding Homo_sapiens

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