C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000188182 Ddx3y-003 ENSMUSG00000069045 10090 - Y:1260772-1265031 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastLiverTestisENSMUST00000188182
Transcript ID Adipose Bladder Brain Breast Liver Testis
ENSMUST00000188182 0.019±0.00 1.267±0.00 0.815±0.17 0.083±0.08 0.535±0.53 0.204±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000336079 DDX3Y-003 protein_coding Homo_sapiens 0 725
ENST00000360160 DDX3Y-001 protein_coding Homo_sapiens 0 710
ENST00000399959 DDX3X-001 protein_coding Homo_sapiens 0 640
ENST00000441189 DDX3X-005 protein_coding Homo_sapiens 0 298
ENST00000457138 DDX3X-201 protein_coding Homo_sapiens 0 640
ENST00000478993 DDX3X-002 nonsense_mediated_decay Homo_sapiens 0 525
ENST00000506389 DDX3YP3-001 processed_pseudogene Homo_sapiens 0 353
ENST00000517322 RP11-613H2.2-001 processed_pseudogene Homo_sapiens 0 217
ENST00000542215 DDX3X-004 processed_transcript Homo_sapiens 0.0000000003 71
ENST00000616050 DDX3X-013 processed_transcript Homo_sapiens 0 361
ENST00000623700 DDX3Y-201 protein_coding Homo_sapiens 0 518

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