C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Fgfr1 oncogene partner
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000097419 Fgfr1op-001 ENSMUSG00000069135 10090 + 17:8165501-8196804 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalColonKidneyLiverMuscleOvaryPlacentaTestisENSMUST00000097419
Transcript ID Adipose Adrenal Colon Kidney Liver Muscle Ovary Placenta Testis
ENSMUST00000097419 0.380±0.00 0.275±0.10 0.173±0.00 0.513±0.01 0.415±0.04 2.235±0.42 0.835±0.33 0.658±0.00 7.670±3.51

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004W6 CIL_0004W6_0002 CGP 17:8128610-8196804
CIL_0002HA CIL_0002HA_0003 CGP 17:8165501-8257127

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005634 IEA nucleus
GO:0005813 IEA centrosome
GO:0006469 IEA negative regulation of protein kinase activity
GO:0008284 IEA positive regulation of cell proliferation
GO:0019901 IEA protein kinase binding
GO:0030292 IEA protein tyrosine kinase inhibitor activity
GO:0030307 IEA positive regulation of cell growth
GO:0030335 IEA positive regulation of cell migration
GO:0034453 IEA microtubule anchoring
GO:0042803 IEA protein homodimerization activity
GO:0048471 IEA perinuclear region of cytoplasm
GO:0061099 IEA negative regulation of protein tyrosine kinase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000349556 FGFR1OP-002 protein_coding Homo_sapiens 0 699
ENST00000366847 FGFR1OP-001 protein_coding Homo_sapiens 0 1509
ENST00000494781 FGFR1OP-003 processed_transcript Homo_sapiens 0 477
ENST00000496181 FGFR1OP-005 processed_transcript Homo_sapiens 0 272
ENST00000609590 CCR6-001 retained_intron Homo_sapiens 0 484
ENST00000622353 FGFR1OP-201 protein_coding Homo_sapiens 0 652

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