C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Fgfr1 oncogene partner
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000024636 Fgfr1op-002 ENSMUSG00000069135 10090 + 17:8165540-8196475 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000024636
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000024636 1.813±0.26 0.605±0.29 5.962±0.13 4.738±1.25 1.584±0.29 1.241±0.26 2.043±0.29 2.124±0.35 2.954±1.71 1.861±0.86 1.705±0.31 2.440±1.18 4.978±1.20 5.869±1.64

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004W6 CIL_0004W6_0002 CGP 17:8128610-8196804
CIL_0002HA CIL_0002HA_0003 CGP 17:8165501-8257127

Gene Ontology

GO IDEvidence TypeGO Description
GO:0034453 IEA microtubule anchoring

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000349556 FGFR1OP-002 protein_coding Homo_sapiens 0 1343
ENST00000366847 FGFR1OP-001 protein_coding Homo_sapiens 0 732
ENST00000494781 FGFR1OP-003 processed_transcript Homo_sapiens 0 477
ENST00000496181 FGFR1OP-005 processed_transcript Homo_sapiens 0 272
ENST00000609590 CCR6-001 retained_intron Homo_sapiens 0 721
ENST00000622353 FGFR1OP-201 protein_coding Homo_sapiens 0 652

Loading