C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: tubulin, alpha 1A
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000072235 Tuba1a 10090 - 15:98949841-98953551 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000097014 Tuba1a-001 98949841-98953551 protein_coding
  ENSMUST00000134214 Tuba1a-002 98950555-98953542 processed_transcript
  ENSMUST00000136329 Tuba1a-003 98950258-98953551 processed_transcript

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000097014ENSMUST00000134214ENSMUST00000136329
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000097014 222.843±78.52 49.868±9.27 103.873±26.89 162.632±0.00 133.223±48.85 69.112±2.55 33.293±8.45 27.828±0.99 18.867±30.33 204.933±16.20 9.483±1.51 167.939±61.16 106.421±24.27 22.765±3.47
ENSMUST00000134214 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.988±0.00 72.594±12.31 92.996±31.90 N/A
ENSMUST00000136329 103.713±31.22 N/A 20.086±0.00 N/A 262.311±0.00 N/A 26.301±2.79 N/A 3.847±0.00 67.125±1.84 N/A N/A N/A 6.006±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00000B CIL_00000B_0002 CGP 15:98931425-98953551

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003924 IEA GTPase activity
GO:0005200 IEA structural constituent of cytoskeleton
GO:0005515 IPI protein binding
GO:0005525 IEA GTP binding
GO:0005634 IEA nucleus
GO:0005881 IDA cytoplasmic microtubule
GO:0006184 IEA GTP catabolic process
GO:0007017 IEA microtubule-based process
GO:0019904 IEA protein domain specific binding
GO:0036464 IEA cytoplasmic ribonucleoprotein granule
GO:0051258 IEA protein polymerization
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000167552 TUBA1A tubulin, alpha 1a protein_coding Homo_sapiens

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