C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00000B_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000123416-ENSG00000167552 CGP 9606 12:49127782-49189324
GeneTranscriptPositionBiotype
ENSG00000167552 (TUBA1A)
tubulin, alpha 1a 		ENST00000295766 (TUBA1A-002) 49184959-49188899 protein_coding
ENST00000301071 (TUBA1A-001) 49184796-49189324 protein_coding
ENST00000546918 (TUBA1A-011) 49185621-49189066 protein_coding
ENST00000547939 (TUBA1A-009) 49185602-49189066 protein_coding
ENST00000548363 (TUBA1A-015) 49186016-49188983 retained_intron
ENST00000550254 (TUBA1A-014) 49186163-49189001 retained_intron
ENST00000550767 (TUBA1A-006) 49185010-49186864 protein_coding
ENST00000550811 (TUBA1A-010) 49186653-49187458 protein_coding
ENST00000552924 (TUBA1A-008) 49185925-49189078 protein_coding
CIL_00000B_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000023004-ENSMUSG00000072235 CGP 10090 15:98931425-98953551
GeneTranscriptPositionBiotype
ENSMUSG00000023004 (Tuba1b)
tubulin, alpha 1B 		ENSMUST00000077577 (Tuba1b-001) 98931425-98934565 protein_coding
ENSMUST00000140969 (Tuba1b-002) 98932776-98934438 retained_intron
ENSMUSG00000072235 (Tuba1a)
tubulin, alpha 1A 		ENSMUST00000097014 (Tuba1a-001) 98949841-98953551 protein_coding
ENSMUST00000134214 (Tuba1a-002) 98950555-98953542 processed_transcript
ENSMUST00000136329 (Tuba1a-003) 98950258-98953551 processed_transcript

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00000B_0001ENSG00000167552ENST00000295766ENST00000301071ENST00000546918ENST00000547939ENST00000548363ENST00000550254ENST00000550767ENST00000550811ENST00000552924CIL_00000B_0002ENSMUSG00000023004ENSMUST00000077577ENSMUST00000140969ENSMUSG00000072235ENSMUST00000097014ENSMUST00000134214ENSMUST00000136329
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00000B_0001ENSG00000167552ENST00000295766ENST00000301071ENST00000550767CIL_00000B_0002ENSMUSG00000023004ENSMUST00000077577ENSMUST00000140969ENSMUSG00000072235ENSMUST00000097014ENSMUST00000134214ENSMUST00000136329
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000167552 ENST00000295766 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 36.887±0.00 44.280±0.00 34.118±0.00
ENST00000301071 14.588±0.00 46.433±0.00 0.946±0.00 173.537±98.80 43.975±0.00 29.211±21.22 11.398±7.67 39.736±0.00 14.605±10.81 18.509±12.52 3.282±0.00 85.308±58.76 88.138±33.09 24.236±9.05
ENST00000546918 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000547939 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000548363 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000550254 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000550767 N/A N/A 1.106±0.00 106.794±0.00 N/A 8.317±0.00 4.205±0.00 0.847±0.00 17.917±0.00 9.797±0.00 5.693±0.00 13.242±0.00 31.829±0.00 N/A
ENST00000550811 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000552924 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000023004 ENSMUST00000077577 106.574±19.98 85.957±4.51 141.940±47.23 62.726±0.00 111.171±12.46 61.155±7.23 37.208±6.66 41.814±2.46 232.299±327.55 86.783±6.01 6.773±1.71 131.965±34.76 126.660±70.24 10.958±2.74
ENSMUST00000140969 462.027±13.92 82.621±8.39 106.681±48.96 N/A 266.550±19.15 153.499±59.67 87.632±11.65 89.350±23.65 183.723±200.00 286.077±23.41 N/A 645.736±51.24 213.441±33.00 41.258±7.31
ENSMUSG00000072235 ENSMUST00000097014 222.843±78.52 49.868±9.27 103.873±26.89 162.632±0.00 133.223±48.85 69.112±2.55 33.293±8.45 27.828±0.99 18.867±30.33 204.933±16.20 9.483±1.51 167.939±61.16 106.421±24.27 22.765±3.47
ENSMUST00000134214 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.988±0.00 72.594±12.31 92.996±31.90 N/A
ENSMUST00000136329 103.713±31.22 N/A 20.086±0.00 N/A 262.311±0.00 N/A 26.301±2.79 N/A 3.847±0.00 67.125±1.84 N/A N/A N/A 6.006±0.00

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