C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: tubulin, alpha 1A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000134214 Tuba1a-002 ENSMUSG00000072235 10090 - 15:98950555-98953542 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; MuscleOvaryPlacentaENSMUST00000134214
Transcript ID Muscle Ovary Placenta
ENSMUST00000134214 3.988±0.00 72.594±12.31 92.996±31.90

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00000B CIL_00000B_0002 CGP 15:98931425-98953551

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000009277 tuba1a-001 protein_coding Danio_rerio 0 619
ENSDART00000077539 tuba1c-001 protein_coding Danio_rerio 0 619
ENSDART00000123518 tuba1b-001 protein_coding Danio_rerio 0 603
ENSDART00000066177 tuba2-001 protein_coding Danio_rerio 0 501
ENSDART00000102715 tuba8l3-001 protein_coding Danio_rerio 0 484
ENST00000295766 TUBA1A-002 protein_coding Homo_sapiens 0 756
ENST00000301071 TUBA1A-001 protein_coding Homo_sapiens 0 756
ENST00000301072 TUBA1C-001 protein_coding Homo_sapiens 0 739
ENST00000332858 TUBA1B-002 retained_intron Homo_sapiens 0 756
ENST00000336023 TUBA1B-001 protein_coding Homo_sapiens 0 756
ENST00000425085 TUBAP-001 processed_pseudogene Homo_sapiens 0 388
ENST00000437364 RP11-346M5.1-001 processed_pseudogene Homo_sapiens 0 392
ENST00000445574 RP11-184J23.2-001 processed_pseudogene Homo_sapiens 0 392
ENST00000501221 RP11-447H19.1-001 processed_pseudogene Homo_sapiens 0 569
ENST00000530835 TUBAP2-001 processed_pseudogene Homo_sapiens 0 689
ENST00000541364 TUBA1C-002 protein_coding Homo_sapiens 0 739
ENST00000546918 TUBA1A-011 protein_coding Homo_sapiens 0 623
ENST00000547765 TUBA1B-006 nonsense_mediated_decay Homo_sapiens 0 756
ENST00000547939 TUBA1A-009 protein_coding Homo_sapiens 0 652
ENST00000548363 TUBA1A-015 retained_intron Homo_sapiens 4e-20 102
ENST00000548470 TUBA1C-007 retained_intron Homo_sapiens 0 739
ENST00000549183 TUBA1C-006 protein_coding Homo_sapiens 4e-20 102
ENST00000549554 TUBA1C-005 processed_transcript Homo_sapiens 2e-17 94
ENST00000549870 TUBA1B-011 protein_coding Homo_sapiens 0.0000000000002 81
ENST00000550254 TUBA1A-014 retained_intron Homo_sapiens 4e-20 102
ENST00000550367 TUBA1B-010 protein_coding Homo_sapiens 0 442
ENST00000550767 TUBA1A-006 protein_coding Homo_sapiens 0 756
ENST00000551324 TUBA1B-008 retained_intron Homo_sapiens 1e-21 108
ENST00000552448 TUBA1C-003 nonsense_mediated_decay Homo_sapiens 0 739
ENST00000552924 TUBA1A-008 protein_coding Homo_sapiens 0 200
ENST00000559595 RP11-522B15.6-001 processed_pseudogene Homo_sapiens 0 355
ENST00000569261 TUBA8P2-001 transcribed_processed_pseudogene Homo_sapiens 1e-28 130
ENST00000611325 RP11-386G11.11-001 processed_pseudogene Homo_sapiens 0 244

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