C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0002IA_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000144895-ENSG00000198843 CGP 9606 3:150546678-150630445
GeneTranscriptPositionBiotype
ENSG00000120742 (SERP1)
stress-associated endoplasmic reticulum protein 1
ENST00000239944 (SERP1-201) 150541994-150546641 protein_coding
ENST00000463647 (SERP1-007) 150566385-150583155 processed_transcript
ENST00000479209 (SERP1-001) 150541998-150603174 protein_coding
ENST00000484608 (SERP1-006) 150566799-150603168 processed_transcript
ENST00000487153 (SERP1-009) 150544292-150546501 protein_coding
ENST00000490945 (SERP1-005) 150565796-150603228 processed_transcript
ENST00000491195 (SERP1-008) 150546790-150603170 processed_transcript
ENST00000491660 (SERP1-011) 150545397-150546499 protein_coding
ENSG00000144895 (EIF2A)
eukaryotic translation initiation factor 2A, 65kDa
ENST00000273435 (EIF2A-004) 150546794-150584242 protein_coding
ENST00000406576 (EIF2A-003) 150546787-150584115 protein_coding
ENST00000460851 (EIF2A-001) 150546694-150584242 protein_coding
ENST00000462221 (EIF2A-013) 150546814-150572061 nonsense_mediated_decay
ENST00000463863 (EIF2A-006) 150546678-150558729 retained_intron
ENST00000465535 (EIF2A-015) 150568032-150584234 protein_coding
ENST00000469331 (EIF2A-011) 150546790-150562908 retained_intron
ENST00000472926 (EIF2A-014) 150567399-150568219 retained_intron
ENST00000473499 (EIF2A-007) 150546725-150552883 retained_intron
ENST00000474505 (EIF2A-009) 150546786-150564899 retained_intron
ENST00000477551 (EIF2A-005) 150552354-150584242 nonsense_mediated_decay
ENST00000482093 (EIF2A-010) 150546788-150568026 protein_coding
ENST00000482471 (EIF2A-016) 150572496-150583903 processed_transcript
ENST00000487799 (EIF2A-002) 150546685-150584023 protein_coding
ENST00000490505 (EIF2A-012) 150546800-150564377 nonsense_mediated_decay
ENST00000494558 (EIF2A-008) 150546767-150568274 nonsense_mediated_decay
ENSG00000271711 (RP11-392O18.2)
ENST00000604339 (RP11-392O18.2-001) 150611262-150611877 processed_pseudogene
CIL_0002IA_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000027810-ENSMUSG00000075700 CGP 10090 3:58525821-58593133
GeneTranscriptPositionBiotype
ENSMUSG00000027808 (Serp1)
stress-associated endoplasmic reticulum protein 1
ENSMUST00000029385 (Serp1-001) 58521969-58525873 protein_coding
ENSMUSG00000027810 (Eif2a)
eukaryotic translation initiation factor 2A
ENSMUST00000029387 (Eif2a-001) 58525821-58557501 protein_coding
ENSMUST00000135876 (Eif2a-002) 58526043-58555644 nonsense_mediated_decay
ENSMUST00000137469 (Eif2a-004) 58526042-58545823 retained_intron
ENSMUST00000138827 (Eif2a-005) 58543280-58545823 retained_intron
ENSMUST00000138848 (Eif2a-007) 58526303-58545611 protein_coding
ENSMUST00000148251 (Eif2a-006) 58544233-58550726 retained_intron
ENSMUST00000154219 (Eif2a-003) 58526056-58557501 nonsense_mediated_decay
ENSMUSG00000075700 (Selt)
selenoprotein T
ENSMUST00000107924 (Selt-001) 58576636-58593133 protein_coding
ENSMUST00000125815 (Selt-002) 58576698-58588812 retained_intron

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002IA_0001ENSG00000120742ENST00000239944ENST00000463647ENST00000479209ENST00000484608ENST00000487153ENST00000490945ENST00000491195ENST00000491660ENSG00000144895ENST00000273435ENST00000406576ENST00000460851ENST00000462221ENST00000463863ENST00000465535ENST00000469331ENST00000472926ENST00000473499ENST00000474505ENST00000477551ENST00000482093ENST00000482471ENST00000487799ENST00000490505ENST00000494558ENSG00000271711ENST00000604339CIL_0002IA_0002ENSMUSG00000027808ENSMUST00000029385ENSMUSG00000027810ENSMUST00000029387ENSMUST00000135876ENSMUST00000137469ENSMUST00000138827ENSMUST00000138848ENSMUST00000148251ENSMUST00000154219ENSMUSG00000075700ENSMUST00000107924ENSMUST00000125815
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002IA_0001ENSG00000120742ENST00000239944ENST00000479209ENST00000487153ENSG00000144895ENST00000273435ENST00000406576ENST00000460851ENST00000465535ENST00000477551ENST00000482471ENST00000487799ENSG00000271711ENST00000604339CIL_0002IA_0002ENSMUSG00000027808ENSMUST00000029385ENSMUSG00000027810ENSMUST00000029387ENSMUST00000135876ENSMUST00000154219ENSMUSG00000075700ENSMUST00000107924ENSMUST00000125815
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000120742 ENST00000239944 32.148±0.00 26.851±0.00 3.703±0.00 21.452±7.59 23.277±8.82 25.545±14.26 4.971±2.96 34.245±15.29 21.965±13.54 31.458±15.95 N/A 24.770±10.29 35.896±6.87 29.607±12.75
ENST00000463647 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000479209 N/A N/A 1.974±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000484608 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000487153 N/A N/A N/A N/A N/A N/A N/A N/A 147.646±0.00 N/A N/A N/A N/A N/A
ENST00000490945 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000491195 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000491660 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000144895 ENST00000273435 N/A N/A N/A 7.919±0.00 N/A N/A N/A 6.083±0.00 N/A N/A N/A N/A N/A N/A
ENST00000406576 N/A N/A N/A N/A N/A N/A 13.074±0.00 N/A N/A N/A 26.910±0.00 11.337±0.00 N/A N/A
ENST00000460851 N/A N/A N/A N/A 7.331±0.00 N/A 4.168±0.00 N/A 8.722±0.00 8.156±0.00 16.583±0.00 17.346±6.31 16.847±0.00 N/A
ENST00000462221 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000463863 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000465535 N/A 33.440±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000469331 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000472926 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000473499 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000474505 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000477551 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 20.687±0.00 N/A N/A N/A
ENST00000482093 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000482471 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 74.143±0.00 88.570±0.00 N/A
ENST00000487799 N/A N/A 2.543±0.00 N/A N/A N/A 12.366±0.00 N/A N/A N/A 3.354±0.00 N/A N/A N/A
ENST00000490505 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000494558 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000271711 ENST00000604339 0.073±0.00 0.199±0.00 0.063±0.00 N/A 0.649±0.00 N/A 0.124±0.08 N/A 0.263±0.00 0.415±0.00 N/A N/A N/A 0.022±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000027808 ENSMUST00000029385 31.555±8.79 245.846±33.67 51.282±5.08 20.649±11.33 38.140±7.80 76.368±51.61 8.906±1.34 58.775±19.43 74.556±18.59 52.217±25.68 5.719±1.20 142.962±74.38 55.038±28.98 35.067±18.66
ENSMUSG00000027810 ENSMUST00000029387 5.083±0.15 N/A 18.698±0.18 12.724±0.57 8.745±0.00 N/A 5.005±1.30 N/A 22.498±5.00 N/A 12.767±1.10 N/A 18.759±6.41 N/A
ENSMUST00000135876 N/A N/A N/A N/A N/A N/A 3.436±0.16 N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000137469 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000138827 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000138848 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000148251 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000154219 N/A N/A N/A 4.612±0.00 N/A N/A N/A N/A N/A N/A 3.281±0.59 N/A 9.671±1.24 N/A
ENSMUSG00000075700 ENSMUST00000107924 32.600±2.79 41.518±4.90 29.281±1.00 19.974±1.44 33.096±2.37 24.590±3.91 27.485±1.21 61.273±4.48 34.961±9.00 37.466±1.96 37.450±2.00 27.873±5.98 27.614±12.66 17.668±7.43
ENSMUST00000125815 N/A 67.370±22.41 N/A N/A N/A 12.216±0.89 N/A N/A N/A N/A N/A 22.396±4.46 N/A N/A

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