C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: trafficking protein particle complex 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000079317 Trappc2 10090 + X:166440574-166453140 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000112192 Trappc2-002 166440776-166453138 protein_coding
  ENSMUST00000112194 Trappc2-003 166445303-166453140 protein_coding
  ENSMUST00000116495 Trappc2-001 166440574-166453140 protein_coding
  ENSMUST00000154573 Trappc2-004 166440776-166451977 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000112192ENSMUST00000112194ENSMUST00000116495ENSMUST00000154573
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000112192 2.224±0.58 2.766±0.00 N/A N/A 1.945±0.76 1.425±0.29 2.083±0.56 2.562±0.88 1.352±0.57 3.211±0.37 N/A 2.661±1.12 N/A 1.068±0.00
ENSMUST00000112194 2.184±0.02 2.067±0.31 N/A 6.357±2.00 1.910±0.45 0.853±0.11 0.833±0.13 2.028±0.38 0.832±0.27 2.314±0.25 N/A 3.620±1.65 3.025±0.35 0.950±0.00
ENSMUST00000116495 1.318±0.27 0.596±0.00 6.923±1.02 6.997±3.24 1.151±0.49 N/A 1.839±0.83 1.137±0.11 3.009±1.13 1.609±0.47 8.494±0.41 1.044±0.39 4.786±0.52 N/A
ENSMUST00000154573 0.669±0.00 0.637±0.00 N/A N/A 0.543±0.00 0.614±0.12 N/A N/A 0.259±0.03 N/A N/A N/A N/A N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005622 IEA intracellular
GO:0005634 IEA nucleus
GO:0005783 IEA endoplasmic reticulum
GO:0005794 IEA Golgi apparatus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 ISS regulation of transcription, DNA-templated
GO:0006888 IEA ER to Golgi vesicle-mediated transport
GO:0008134 ISS transcription factor binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000068831 egfl6 EGF-like-domain, multiple 6 protein_coding Danio_rerio
ENSDARG00000097660 trappc2 trafficking protein particle complex 2 protein_coding Danio_rerio
ENSG00000196459 TRAPPC2 trafficking protein particle complex 2 protein_coding Homo_sapiens
ENSG00000256060 TRAPPC2P1 trafficking protein particle complex 2B protein_coding Homo_sapiens

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