C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: trafficking protein particle complex 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000112194 Trappc2-003 ENSMUSG00000079317 10090 + X:166445303-166453140 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000112194
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000112194 2.184±0.02 2.067±0.31 6.357±2.00 1.910±0.45 0.853±0.11 0.833±0.13 2.028±0.38 0.832±0.27 2.314±0.25 3.620±1.65 3.025±0.35 0.950±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005634 IEA nucleus
GO:0005783 IEA endoplasmic reticulum
GO:0005794 IEA Golgi apparatus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 ISS regulation of transcription, DNA-templated
GO:0006888 IEA ER to Golgi vesicle-mediated transport
GO:0008134 ISS transcription factor binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000359680 TRAPPC2-201 protein_coding Homo_sapiens 0 582
ENST00000380578 TRAPPC2-001 retained_intron Homo_sapiens 0 431
ENST00000380579 TRAPPC2-002 protein_coding Homo_sapiens 0 582
ENST00000415662 TRAPPC2P10-001 unprocessed_pseudogene Homo_sapiens 0 222
ENST00000426293 TRAPPC2P5-001 unprocessed_pseudogene Homo_sapiens 0 206
ENST00000458511 TRAPPC2-005 protein_coding Homo_sapiens 0 582
ENST00000517589 TRAPPC2P2-001 processed_pseudogene Homo_sapiens 0 285
ENST00000518847 TRAPPC2-008 protein_coding Homo_sapiens 0 302
ENST00000519382 TRAPPC2-004 retained_intron Homo_sapiens 0 329
ENST00000519885 TRAPPC2-006 protein_coding Homo_sapiens 0 431
ENST00000543226 TRAPPC2P1-002 protein_coding Homo_sapiens 0 566
ENST00000596755 TRAPPC2P1-003 protein_coding Homo_sapiens 0 566

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