C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: trafficking protein particle complex 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000112192 Trappc2-002 ENSMUSG00000079317 10090 + X:166440776-166453138 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonHeartKidneyLiverLungOvaryTestisENSMUST00000112192
Transcript ID Adipose Adrenal Breast Colon Heart Kidney Liver Lung Ovary Testis
ENSMUST00000112192 2.224±0.58 2.766±0.00 1.945±0.76 1.425±0.29 2.083±0.56 2.562±0.88 1.352±0.57 3.211±0.37 2.661±1.12 1.068±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005622 IEA intracellular
GO:0006888 IEA ER to Golgi vesicle-mediated transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000359680 TRAPPC2-201 protein_coding Homo_sapiens 0 300
ENST00000380578 TRAPPC2-001 retained_intron Homo_sapiens 0 294
ENST00000380579 TRAPPC2-002 protein_coding Homo_sapiens 0 294
ENST00000415662 TRAPPC2P10-001 unprocessed_pseudogene Homo_sapiens 1e-36 156
ENST00000426293 TRAPPC2P5-001 unprocessed_pseudogene Homo_sapiens 5e-36 154
ENST00000458511 TRAPPC2-005 protein_coding Homo_sapiens 0 294
ENST00000517589 TRAPPC2P2-001 processed_pseudogene Homo_sapiens 2e-20 102
ENST00000518847 TRAPPC2-008 protein_coding Homo_sapiens 0 294
ENST00000519382 TRAPPC2-004 retained_intron Homo_sapiens 0 294
ENST00000519885 TRAPPC2-006 protein_coding Homo_sapiens 0 300
ENST00000543226 TRAPPC2P1-002 protein_coding Homo_sapiens 0 283
ENST00000596755 TRAPPC2P1-003 protein_coding Homo_sapiens 0 289

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