C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: trafficking protein particle complex 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000116495 Trappc2-001 ENSMUSG00000079317 10090 + X:166440574-166453140 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastHeartKidneyLiverLungMuscleOvaryPlacentaENSMUST00000116495
Transcript ID Adipose Adrenal Bladder Brain Breast Heart Kidney Liver Lung Muscle Ovary Placenta
ENSMUST00000116495 1.318±0.27 0.596±0.00 6.923±1.02 6.997±3.24 1.151±0.49 1.839±0.83 1.137±0.11 3.009±1.13 1.609±0.47 8.494±0.41 1.044±0.39 4.786±0.52

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005634 IEA nucleus
GO:0005783 IEA endoplasmic reticulum
GO:0005794 IEA Golgi apparatus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 ISS regulation of transcription, DNA-templated
GO:0006888 IEA ER to Golgi vesicle-mediated transport
GO:0008134 ISS transcription factor binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000359680 TRAPPC2-201 protein_coding Homo_sapiens 0 590
ENST00000380578 TRAPPC2-001 retained_intron Homo_sapiens 0 433
ENST00000380579 TRAPPC2-002 protein_coding Homo_sapiens 0 584
ENST00000415662 TRAPPC2P10-001 unprocessed_pseudogene Homo_sapiens 0 222
ENST00000426293 TRAPPC2P5-001 unprocessed_pseudogene Homo_sapiens 0 206
ENST00000458511 TRAPPC2-005 protein_coding Homo_sapiens 0 584
ENST00000517589 TRAPPC2P2-001 processed_pseudogene Homo_sapiens 0 285
ENST00000518847 TRAPPC2-008 protein_coding Homo_sapiens 0 303
ENST00000519382 TRAPPC2-004 retained_intron Homo_sapiens 0 331
ENST00000519885 TRAPPC2-006 protein_coding Homo_sapiens 0 438
ENST00000543226 TRAPPC2P1-002 protein_coding Homo_sapiens 0 568
ENST00000596755 TRAPPC2P1-003 protein_coding Homo_sapiens 0 573

Loading