C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0008NI_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
hs113 VISTA 9606 11:31875944-32477188
GeneTranscriptPositionBiotype
ENSG00000049449 (RCN1)
reticulocalbin 1, EF-hand calcium binding domain 		ENST00000054950 (RCN1-002) 32090904-32105755 protein_coding
ENST00000506388 (RCN1-011) 31816566-31887043 processed_transcript
ENST00000527337 (RCN1-007) 32100547-32104684 nonsense_mediated_decay
ENST00000528630 (RCN1-008) 32104386-32105532 protein_coding
ENST00000530146 (RCN1-012) 31885774-31917941 processed_transcript
ENST00000530348 (RCN1-013) 31812391-32100594 protein_coding
ENST00000531345 (RCN1-004) 32101995-32105531 retained_intron
ENST00000532474 (RCN1-006) 32100532-32104602 processed_transcript
ENST00000532721 (RCN1-005) 32091610-32098458 protein_coding
ENST00000532942 (RCN1-001) 31816384-32104665 protein_coding
ENST00000533898 (RCN1-003) 32096534-32105536 retained_intron
ENSG00000183242 (WT1-AS)
WT1 antisense RNA 		ENST00000395900 (WT1-AS-001) 32435579-32441404 antisense
ENST00000442957 (WT1-AS-005) 32438370-32439132 antisense
ENST00000459866 (WT1-AS-003) 32435776-32437051 antisense
ENST00000478367 (WT1-AS-004) 32437623-32438326 antisense
ENST00000494911 (WT1-AS-002) 32435518-32438707 antisense
ENST00000525436 (WT1-AS-006) 32435801-32458769 antisense
ENST00000612620 (WT1-AS-201) 32437070-32437197 misc_RNA
ENST00000615677 (WT1-AS-202) 32437623-32437701 misc_RNA
ENSG00000184937 (WT1)
Wilms tumor 1 		ENST00000332351 (WT1-001) 32387775-32435630 protein_coding
ENST00000379077 (WT1-005) 32387775-32435387 nonsense_mediated_decay
ENST00000379079 (WT1-002) 32387775-32430813 protein_coding
ENST00000448076 (WT1-009) 32388679-32435535 protein_coding
ENST00000452863 (WT1-004) 32387784-32435345 protein_coding
ENST00000526685 (WT1-007) 32396257-32400615 protein_coding
ENST00000527775 (WT1-006) 32396366-32429029 protein_coding
ENST00000527882 (WT1-008) 32389042-32417597 protein_coding
ENST00000530998 (WT1-003) 32387778-32430813 protein_coding
ENSG00000227160 (THEM7P)
thioesterase superfamily member 7, pseudogene 		ENST00000419556 (THEM7P-001) 32112049-32254395 unitary_pseudogene
ENST00000525689 (THEM7P-002) 32229724-32343409 processed_transcript
ENSG00000254584 (RP1-17K7.2)
 ENST00000531627 (RP1-17K7.2-002) 32040106-32041248 antisense
ENST00000531962 (RP1-17K7.2-001) 32035981-32041318 antisense
ENSG00000254627 (RP1-17K7.1)
 ENST00000533832 (RP1-17K7.1-001) 32064912-32072173 sense_intronic
ENSG00000254836 (RP1-17K7.3)
 ENST00000525382 (RP1-17K7.3-001) 32052843-32053260 antisense
ENSG00000255375 (RP1-65P5.5)
 ENST00000525133 (RP1-65P5.5-001) 32132699-32143579 lincRNA
ENSG00000255490 (EIF4A2P5)
eukaryotic translation initiation factor 4A2 pseudogene 5 		ENST00000529914 (EIF4A2P5-001) 32085111-32085712 processed_pseudogene
ENSG00000273677 (WT1-AS_2)
WT1 antisense RNA conserved region 2 		ENST00000613208 (WT1-AS_2.1-201) 32436311-32436447 misc_RNA
ENSG00000273908 (WT1-AS_7)
WT1 antisense RNA conserved region 7 		ENST00000426618 (WT1-AS_7.1-201) 32439716-32440009 misc_RNA
ENSG00000277119 (WT1-AS_8)
WT1 antisense RNA conserved region 8 		ENST00000615200 (WT1-AS_8.1-201) 32440109-32440383 misc_RNA
CIL_0008NI_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
hs113 VISTA 10090 2:105033715-105635145
GeneTranscriptPositionBiotype
ENSMUSG00000005973 (Rcn1)
reticulocalbin 1 		ENSMUST00000006128 (Rcn1-001) 105386291-105399319 protein_coding
ENSMUST00000127019 (Rcn1-002) 105386929-105395348 retained_intron
ENSMUSG00000016458 (Wt1)
Wilms tumor 1 homolog 		ENSMUST00000111098 (Wt1-008) 105130883-105173612 protein_coding
ENSMUST00000111099 (Wt1-006) 105130883-105173616 protein_coding
ENSMUST00000133470 (Wt1-002) 105127001-105172265 protein_coding
ENSMUST00000139585 (Wt1-004) 105127210-105172681 protein_coding
ENSMUST00000143043 (Wt1-001) 105126529-105173612 protein_coding
ENSMUST00000145107 (Wt1-005) 105130800-105133950 retained_intron
ENSMUST00000146842 (Wt1-003) 105126996-105172342 protein_coding
ENSMUST00000153944 (Wt1-009) 105162808-105170011 retained_intron
ENSMUSG00000055312 (Them7)
thioesterase superfamily member 7 		ENSMUST00000068813 (Them7-001) 105224320-105379796 protein_coding
ENSMUST00000131060 (Them7-002) 105224342-105379035 processed_transcript
ENSMUSG00000080859 (Rpl10-ps1)
ribosomal protein L10, pseudogene 1 		ENSMUST00000119438 (Rpl10-ps1-001) 105554201-105554845 transcribed_processed_pseudogene
ENSMUSG00000086029 (Pax6os1)
paired box 6 opposite strand 1 		ENSMUST00000126948 (Pax6os1-002) 105536939-105670280 antisense
ENSMUST00000149133 (Pax6os1-001) 105536080-105670330 antisense
ENSMUSG00000086764 (4930527A07Rik)
RIKEN cDNA 4930527A07 gene 		ENSMUST00000130677 (4930527A07Rik-001) 105476501-105477357 lincRNA
ENSMUSG00000098459 (Gm27308)
predicted gene, 27308 		ENSMUST00000184807 (Gm27308-201) 105125222-105125454 misc_RNA
ENSMUSG00000099166 (Gm27715)
predicted gene, 27715 		ENSMUST00000184714 (Gm27715-201) 105121792-105122051 misc_RNA
ENSMUSG00000099243 (Gm27538)
predicted gene, 27538 		ENSMUST00000185065 (Gm27538-201) 105122188-105122481 misc_RNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestis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
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestis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
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000049449 ENST00000054950 10.534±0.00 N/A 1.064±0.00 1.870±0.01 5.646±1.79 5.630±1.87 2.592±0.84 6.032±2.47 3.690±0.00 4.582±0.92 3.287±1.73 18.629±10.64 51.938±10.33 6.538±2.23
ENST00000506388 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000527337 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000528630 N/A 37.880±0.00 N/A N/A 18.043±0.00 N/A N/A 25.432±0.00 14.500±0.00 22.129±0.00 8.510±0.00 N/A N/A 32.778±0.00
ENST00000530146 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000530348 N/A N/A N/A N/A N/A N/A N/A N/A N/A 8.232±0.00 N/A N/A N/A N/A
ENST00000531345 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000532474 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000532721 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.767±0.00 N/A N/A N/A
ENST00000532942 N/A N/A 3.095±0.00 4.676±1.20 9.619±0.00 2.961±0.00 0.881±0.00 10.277±0.00 N/A 5.476±0.00 N/A 13.675±0.00 29.458±0.00 6.531±0.00
ENST00000533898 N/A N/A 0.485±0.00 N/A N/A N/A 0.423±0.00 N/A N/A 1.794±0.00 N/A N/A N/A N/A
ENSG00000183242 ENST00000395900 0.030±0.00 0.046±0.00 N/A 0.032±0.00 0.011±0.00 N/A N/A 1.378±0.00 0.034±0.00 N/A N/A 4.231±0.00 N/A N/A
ENST00000442957 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000459866 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000478367 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000494911 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000525436 N/A 0.214±0.00 N/A 0.052±0.00 0.036±0.00 N/A N/A N/A 0.051±0.00 N/A 0.019±0.00 N/A N/A N/A
ENST00000612620 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000615677 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000184937 ENST00000332351 N/A N/A 0.327±0.00 N/A N/A N/A N/A N/A 0.025±0.00 N/A N/A 13.872±12.80 1.057±0.00 N/A
ENST00000379077 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000379079 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 7.878±1.11
ENST00000448076 N/A N/A N/A 0.032±0.00 N/A N/A N/A N/A N/A N/A N/A 0.031±0.00 1.987±0.40 6.874±0.00
ENST00000452863 N/A N/A N/A 0.022±0.00 N/A N/A 0.654±0.36 6.239±0.00 0.150±0.00 0.135±0.00 0.015±0.00 17.746±8.95 1.669±0.26 5.292±0.00
ENST00000526685 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000527775 N/A N/A N/A N/A N/A 1.370±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000527882 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000530998 0.031±0.00 N/A N/A N/A 0.146±0.00 N/A N/A N/A N/A N/A N/A 3.366±0.00 N/A N/A
ENSG00000227160 ENST00000419556 0.144±0.00 0.049±0.00 N/A 0.107±0.00 0.128±0.00 0.093±0.00 0.066±0.00 N/A N/A 0.065±0.00 N/A 0.104±0.00 N/A N/A
ENST00000525689 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.052±0.00 N/A 0.087±0.00 0.191±0.00 0.057±0.00
ENSG00000254584 ENST00000531627 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.015±2.10
ENST00000531962 0.475±0.00 0.329±0.00 N/A 0.159±0.00 0.361±0.00 0.733±0.00 0.348±0.00 1.087±0.00 0.355±0.00 0.611±0.00 0.577±0.00 0.056±0.00 N/A 1.757±1.28
ENSG00000254627 ENST00000533832 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.144±0.00 N/A 0.270±0.06
ENSG00000254836 ENST00000525382 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.235±0.11
ENSG00000255375 ENST00000525133 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.054±0.00 0.067±0.00 0.735±0.02
ENSG00000255490 ENST00000529914 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.041±0.00
ENSG00000273677 ENST00000613208 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 22.062±0.00 N/A 0.409±0.00
ENSG00000273908 ENST00000426618 N/A N/A N/A N/A N/A N/A N/A N/A 0.228±0.00 N/A N/A N/A N/A N/A
ENSG00000277119 ENST00000615200 N/A N/A N/A N/A N/A N/A N/A N/A 3.881±0.00 N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000005973 ENSMUST00000006128 17.098±10.71 46.564±34.31 35.480±6.74 13.545±2.63 12.994±9.29 3.566±2.90 3.988±0.40 2.944±0.77 4.563±3.58 21.950±5.98 1.881±0.22 28.701±25.78 14.691±8.21 2.125±0.79
ENSMUST00000127019 N/A N/A 5.441±0.00 3.900±0.00 1.505±0.00 N/A 1.626±0.44 0.839±0.07 1.475±0.37 N/A 0.604±0.22 23.035±6.51 8.949±1.61 N/A
ENSMUSG00000016458 ENSMUST00000111098 N/A N/A 0.486±0.16 0.024±0.01 N/A N/A 0.507±0.15 N/A 0.130±0.06 N/A N/A N/A 0.737±0.33 1.827±1.02
ENSMUST00000111099 N/A N/A N/A 0.036±0.00 N/A 0.149±0.00 N/A N/A 0.037±0.00 N/A N/A 5.300±0.00 0.210±0.06 1.670±0.00
ENSMUST00000133470 1.270±0.14 0.801±0.27 N/A 0.037±0.00 N/A 0.259±0.12 0.475±0.00 2.385±0.00 0.033±0.00 1.136±0.70 N/A 26.604±7.24 0.848±0.00 4.237±0.00
ENSMUST00000139585 23.675±20.02 0.599±0.00 0.706±0.36 0.072±0.00 N/A 0.538±0.16 1.542±0.20 4.711±0.82 0.277±0.21 1.391±0.39 N/A 19.587±4.42 1.260±0.68 10.023±1.63
ENSMUST00000143043 10.166±9.03 0.238±0.10 0.706±0.32 0.018±0.00 N/A 0.163±0.07 0.495±0.13 1.802±0.24 0.235±0.18 0.658±0.26 N/A 13.242±4.28 0.789±0.60 4.622±0.62
ENSMUST00000145107 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000146842 N/A N/A N/A 0.043±0.00 0.026±0.00 0.294±0.00 N/A N/A 0.014±0.00 N/A 0.054±0.00 N/A N/A N/A
ENSMUST00000153944 N/A N/A N/A N/A N/A N/A N/A N/A 0.075±0.00 N/A N/A N/A N/A N/A
ENSMUSG00000055312 ENSMUST00000068813 0.221±0.09 0.103±0.03 0.036±0.01 0.031±0.00 0.173±0.09 0.075±0.00 0.058±0.03 62.876±4.44 5.793±4.78 N/A N/A 0.310±0.19 0.868±0.79 0.222±0.13
ENSMUST00000131060 0.351±0.15 0.148±0.10 N/A 0.072±0.00 0.353±0.15 0.078±0.01 0.181±0.09 76.558±22.60 10.438±7.07 0.140±0.06 N/A 0.668±0.35 N/A 0.218±0.09
ENSMUSG00000080859 ENSMUST00000119438 N/A N/A N/A 21.190±0.00 N/A N/A N/A N/A 60.645±0.58 N/A N/A N/A N/A N/A
ENSMUSG00000086029 ENSMUST00000126948 N/A N/A 0.015±0.00 0.062±0.04 N/A N/A N/A N/A N/A N/A N/A N/A 0.010±0.00 0.090±0.00
ENSMUST00000149133 N/A N/A N/A 0.043±0.03 N/A 0.067±0.00 N/A N/A 0.010±0.00 N/A N/A N/A N/A 0.044±0.02
ENSMUSG00000086764 ENSMUST00000130677 N/A N/A N/A 0.086±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.989±0.76
ENSMUSG00000098459 ENSMUST00000184807 0.852±0.00 N/A 0.383±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 3.154±0.43 N/A 1.923±0.56
ENSMUSG00000099166 ENSMUST00000184714 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.588±0.63 0.183±0.00 N/A
ENSMUSG00000099243 ENSMUST00000185065 0.399±0.00 N/A N/A N/A N/A N/A N/A 0.299±0.00 0.079±0.00 N/A N/A 0.604±0.22 0.284±0.14 0.980±0.92

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