C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00017T_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000070006-ENSDARG00000045936 CGP 7955 7:16589012-16662410
GeneTranscriptPositionBiotype
ENSDARG00000070006 (rcn1)
reticulocalbin 1, EF-hand calcium binding domain 		ENSDART00000102363 (rcn1-201) 16589012-16599433 protein_coding
CIL_00017T_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000005973-ENSMUSG00000027168 CGP 10090 2:105386291-105697364
GeneTranscriptPositionBiotype
ENSMUSG00000005973 (Rcn1)
reticulocalbin 1 		ENSMUST00000006128 (Rcn1-001) 105386291-105399319 protein_coding
ENSMUST00000127019 (Rcn1-002) 105386929-105395348 retained_intron
ENSMUSG00000080859 (Rpl10-ps1)
ribosomal protein L10, pseudogene 1 		ENSMUST00000119438 (Rpl10-ps1-001) 105554201-105554845 transcribed_processed_pseudogene
ENSMUSG00000086029 (Pax6os1)
paired box 6 opposite strand 1 		ENSMUST00000126948 (Pax6os1-002) 105536939-105670280 antisense
ENSMUST00000149133 (Pax6os1-001) 105536080-105670330 antisense
ENSMUSG00000086764 (4930527A07Rik)
RIKEN cDNA 4930527A07 gene 		ENSMUST00000130677 (4930527A07Rik-001) 105476501-105477357 lincRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00017T_0001ENSDARG00000070006ENSDART00000102363CIL_00017T_0002ENSMUSG00000005973ENSMUST00000006128ENSMUST00000127019ENSMUSG00000080859ENSMUST00000119438ENSMUSG00000086029ENSMUST00000126948ENSMUST00000149133ENSMUSG00000086764ENSMUST00000130677
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00017T_0001ENSDARG00000070006ENSDART00000102363CIL_00017T_0002ENSMUSG00000005973ENSMUST00000006128ENSMUST00000127019ENSMUSG00000080859ENSMUST00000119438ENSMUSG00000086029ENSMUST00000126948ENSMUST00000149133ENSMUSG00000086764ENSMUST00000130677
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000070006 ENSDART00000102363 N/A N/A N/A 0.268±0.04 N/A N/A 1.119±0.84 N/A 0.404±0.00 N/A 0.684±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000005973 ENSMUST00000006128 17.098±10.71 46.564±34.31 35.480±6.74 13.545±2.63 12.994±9.29 3.566±2.90 3.988±0.40 2.944±0.77 4.563±3.58 21.950±5.98 1.881±0.22 28.701±25.78 14.691±8.21 2.125±0.79
ENSMUST00000127019 N/A N/A 5.441±0.00 3.900±0.00 1.505±0.00 N/A 1.626±0.44 0.839±0.07 1.475±0.37 N/A 0.604±0.22 23.035±6.51 8.949±1.61 N/A
ENSMUSG00000080859 ENSMUST00000119438 N/A N/A N/A 21.190±0.00 N/A N/A N/A N/A 60.645±0.58 N/A N/A N/A N/A N/A
ENSMUSG00000086029 ENSMUST00000126948 N/A N/A 0.015±0.00 0.062±0.04 N/A N/A N/A N/A N/A N/A N/A N/A 0.010±0.00 0.090±0.00
ENSMUST00000149133 N/A N/A N/A 0.043±0.03 N/A 0.067±0.00 N/A N/A 0.010±0.00 N/A N/A N/A N/A 0.044±0.02
ENSMUSG00000086764 ENSMUST00000130677 N/A N/A N/A 0.086±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.989±0.76

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