C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: predicted gene 12117
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000098456 Gm12117 10090 - 11:33275758-33276737 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000183831 Gm12117-002 33275879-33276334 protein_coding
  ENSMUST00000184486 Gm12117-001 33275758-33276737 translated_processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastHeartLiverOvaryPlacentaTestisENSMUST00000183831ENSMUST00000184486
Transcript ID Adipose Adrenal Bladder Brain Breast Heart Liver Ovary Placenta Testis
ENSMUST00000183831 0.091±0.00 0.229±0.08 N/A 0.201±0.00 0.114±0.00 0.082±0.00 0.021±0.00 N/A 0.082±0.00 0.111±0.04
ENSMUST00000184486 N/A N/A 0.028±0.00 0.062±0.02 N/A N/A 0.016±0.01 0.046±0.01 0.072±0.03 0.061±0.01

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00092S CIL_00092S_0002 VISTA 11:32891798-33493112
CIL_00097F CIL_00097F_0002 VISTA 11:32999598-33601607
CIL_00088M CIL_00088M_0002 VISTA 11:33042866-33643782
CIL_000977 CIL_000977_0002 VISTA 11:33092412-33693558
CIL_00098H CIL_00098H_0002 VISTA 11:33099828-33701076
CIL_0008SG CIL_0008SG_0002 VISTA 11:33129906-33731024
CIL_0007NP CIL_0007NP_0002 UCNEbase 11:33192157-33430428

Gene Ontology
GO IDEvidence TypeGO Description
GO:0016620 IEA oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor
GO:0055114 IEA oxidation-reduction process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000043457 gapdh glyceraldehyde-3-phosphate dehydrogenase protein_coding Danio_rerio
ENSG00000111640 GAPDH glyceraldehyde-3-phosphate dehydrogenase protein_coding Homo_sapiens

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