C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: glyceraldehyde-3-phosphate dehydrogenase
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000043457 gapdh 7955 - 16:19254364-19261820 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000063800 gapdh-001 19254364-19259325 protein_coding
  ENSDART00000135146 gapdh-003 19256885-19259265 protein_coding
  ENSDART00000139939 gapdh-004 19255377-19259246 protein_coding
  ENSDART00000147739 gapdh-002 19255690-19261820 protein_coding
  ENSDART00000148397 gapdh-005 19255773-19259301 retained_intron

Danio rerio EnsemblZv9

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Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000063800ENSDART00000139939
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000063800 19.631±19.92 9412.543±8879.72 781.347±712.13 907.397±0.00 9841.980±0.00
ENSDART00000139939 18.353±0.00 N/A N/A N/A N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000226 ISS microtubule cytoskeleton organization
GO:0004365 IEA glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
GO:0005634 ISS nucleus
GO:0005737 IEA cytoplasm
GO:0005829 ISS cytosol
GO:0005856 IEA cytoskeleton
GO:0006006 IEA glucose metabolic process
GO:0006096 IEA glycolysis
GO:0006915 IEA apoptotic process
GO:0008017 ISS microtubule binding
GO:0015630 ISS microtubule cytoskeleton
GO:0016491 IEA oxidoreductase activity
GO:0016620 IEA oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor
GO:0016740 IEA transferase activity
GO:0035605 ISS peptidyl-cysteine S-nitrosylase activity
GO:0035606 ISS peptidyl-cysteine S-trans-nitrosylation
GO:0050661 IEA NADP binding
GO:0050821 ISS protein stabilization
GO:0051287 IEA NAD binding
GO:0051402 ISS neuron apoptotic process
GO:0055114 IEA oxidation-reduction process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000111640 GAPDH glyceraldehyde-3-phosphate dehydrogenase protein_coding Homo_sapiens
ENSMUSG00000057666 Gapdh glyceraldehyde-3-phosphate dehydrogenase protein_coding Mus_musculus
ENSMUSG00000078308 Gm7293 predicted gene 7293 protein_coding Mus_musculus
ENSMUSG00000081607 Gm15294 predicted gene 15294 protein_coding Mus_musculus
ENSMUSG00000097148 Gm3839 predicted pseudogene 3839 protein_coding Mus_musculus
ENSMUSG00000098456 Gm12117 predicted gene 12117 protein_coding Mus_musculus
ENSMUSG00000099294 Gm11214 predicted gene 11214 protein_coding Mus_musculus

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