C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: activating transcription factor 7
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000184485 Atf7-006 ENSMUSG00000099083 10090 - 15:102533572-102625439 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalColonKidneyLiverLungOvaryTestisENSMUST00000184485
Transcript ID Adrenal Colon Kidney Liver Lung Ovary Testis
ENSMUST00000184485 4.369±0.56 4.596±0.57 4.175±0.41 1.945±0.00 7.372±0.13 7.639±0.00 2.515±0.17

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0009B4 CIL_0009B4_0002 VISTA 15:102394217-102994945
CIL_00061S CIL_00061S_0002 CGP 15:102525946-102672352

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0043565 IEA sequence-specific DNA binding
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000077839 atf7b-201 protein_coding Danio_rerio 0 198
ENSDART00000104042 atf7b-202 protein_coding Danio_rerio 0 198
ENSDART00000136076 atf7b-001 protein_coding Danio_rerio 0 198
ENST00000420353 ATF7-001 protein_coding Homo_sapiens 0 2621
ENST00000456903 ATF7-006 protein_coding Homo_sapiens 0 2684
ENST00000546661 ATF7-003 processed_transcript Homo_sapiens 0 1144
ENST00000548118 ATF7-009 protein_coding Homo_sapiens 0 512
ENST00000548446 ATF7-007 protein_coding Homo_sapiens 0 1786
ENST00000550373 ATF7-008 processed_transcript Homo_sapiens 0 189
ENST00000551087 ATF7-004 processed_transcript Homo_sapiens 0 438
ENST00000551480 ATF7-005 protein_coding Homo_sapiens 0 544
ENST00000588078 ATF7-011 protein_coding Homo_sapiens 0 484
ENST00000588232 ATF7-010 protein_coding Homo_sapiens 0 547
ENST00000589726 ATF7-013 retained_intron Homo_sapiens 5e-22 108
ENST00000591397 ATF7-002 protein_coding Homo_sapiens 0 453
ENST00000591834 RP11-793H13.10-001 protein_coding Homo_sapiens 0 1836

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