C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: zinc finger protein 236
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000149720 znf236-001 ENSDARG00000095890 7955 + 16:7964346-8014222 protein_coding

Danio rerio EnsemblZv9

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000149720
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000149720 4.952±0.00 2.061±0.84 1.353±0.28 0.244±0.00 1.694±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000017 CIL_000017_0001 CGP 16:7964346-8063371

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0008150 ND biological_process
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000171071 Zfp236-002 protein_coding Mus_musculus 2e-34 154
ENSMUST00000182122 Zfp236-001 protein_coding Mus_musculus 1e-34 154
ENSMUST00000183048 Zfp236-003 nonsense_mediated_decay Mus_musculus 1e-34 154
ENSMUST00000183324 Zfp236-004 nonsense_mediated_decay Mus_musculus 6e-35 154
ENST00000253159 ZNF236-001 protein_coding Homo_sapiens 4e-30 139
ENST00000320610 ZNF236-002 protein_coding Homo_sapiens 3e-30 139
ENST00000543926 ZNF236-003 nonsense_mediated_decay Homo_sapiens 4e-30 139

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