C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: heterogeneous nuclear ribonucleoprotein A1 pseudogene 14
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000440352 HNRNPA1P14-001 ENSG00000227638 9606 - 9:88410529-88411463 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLungMuscleOvaryPlacentaTestisENST00000440352
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Lung Muscle Ovary Placenta Testis
ENST00000440352 0.292±0.00 0.277±0.00 0.286±0.00 0.148±0.00 0.325±0.11 0.121±0.00 0.133±0.00 0.322±0.00 0.042±0.00 0.026±0.00 0.187±0.10 0.082±0.00 0.062±0.04

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000078 CIL_000078_0002 CGP 9:88388419-88584274

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000087351 Hnrnpa1-202 protein_coding Mus_musculus 0 989
ENSMUST00000168019 Gm10052-001 processed_pseudogene Mus_musculus 0 987
ENSMUST00000117081 Gm5643-001 processed_pseudogene Mus_musculus 0 946
ENSMUST00000022493 Gm5803-001 processed_pseudogene Mus_musculus 0 905
ENSMUST00000050143 Gm7729-001 unprocessed_pseudogene Mus_musculus 0 793
ENSMUST00000036004 Hnrnpa1-201 protein_coding Mus_musculus 0 793
ENSMUST00000040649 AC165425.1-201 pseudogene Mus_musculus 0 773
ENSMUST00000118970 Gm16216-001 processed_pseudogene Mus_musculus 0 765
ENSMUST00000119097 Gm13418-001 processed_pseudogene Mus_musculus 0 676
ENSMUST00000184038 Gm5269-001 translated_processed_pseudogene Mus_musculus 0 577
ENSMUST00000122346 Gm11860-001 processed_pseudogene Mus_musculus 0 549
ENSMUST00000120205 Gm13297-001 processed_pseudogene Mus_musculus 0 549
ENSMUST00000178732 RP24-383H12.1-001 processed_pseudogene Mus_musculus 0 505
ENSMUST00000189260 RP23-389M9.4-001 processed_pseudogene Mus_musculus 0 503
ENSMUST00000119387 Gm12458-001 processed_pseudogene Mus_musculus 0 451
ENSMUST00000129154 Hnrnpa1l2-ps-001 processed_pseudogene Mus_musculus 0 355
ENSMUST00000181363 Gm8652-001 processed_pseudogene Mus_musculus 0 298

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