C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0000GF_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000015472-ENSDARG00000032199 CGP 7955 14:31961765-32335756
GeneTranscriptPositionBiotype
ENSDARG00000015472 (gpc4)
glypican 4
ENSDART00000026569 (gpc4-001) 31961765-32020938 protein_coding
ENSDARG00000032199 (gpc3)
glypican 3
ENSDART00000039554 (gpc3-201) 32047588-32335756 protein_coding
ENSDART00000129345 (gpc3-001) 32047588-32195448 protein_coding
ENSDART00000143894 (gpc3-002) 32335596-32335756 protein_coding
CIL_0000GF_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000076716-ENSG00000147257 CGP 9606 X:133300103-133985895
GeneTranscriptPositionBiotype
ENSG00000076716 (GPC4)
glypican 4
ENST00000370828 (GPC4-001) 133300103-133415490 protein_coding
ENSG00000147257 (GPC3)
glypican 3
ENST00000370818 (GPC3-001) 133535745-133985895 protein_coding
ENST00000394299 (GPC3-201) 133535754-133985646 protein_coding
ENST00000406757 (GPC3-002) 133596366-133753702 protein_coding
ENSG00000227008 (RP3-417G15.1)
ENST00000426577 (RP3-417G15.1-001) 133670971-133671386 processed_pseudogene
ENSG00000233260 (RPSAP63)
ribosomal protein SA pseudogene 63
ENST00000412013 (RPSAP63-001) 133762796-133763683 processed_pseudogene
CIL_0000GF_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000031119-ENSMUSG00000055653 CGP 10090 X:52053021-52613950
GeneTranscriptPositionBiotype
ENSMUSG00000031119 (Gpc4)
glypican 4
ENSMUST00000033450 (Gpc4-001) 52053021-52165252 protein_coding
ENSMUSG00000055110 (A630012P03Rik)
RIKEN cDNA A630012P03 gene
ENSMUST00000068507 (A630012P03Rik-201) 52575843-52619047 antisense
ENSMUST00000114854 (A630012P03Rik-001) 52575843-52619047 antisense
ENSMUSG00000055653 (Gpc3)
glypican 3
ENSMUST00000069360 (Gpc3-001) 52272426-52613921 protein_coding
ENSMUST00000114857 (Gpc3-002) 52387664-52613950 protein_coding
ENSMUSG00000086704 (Gm14582)
predicted gene 14582
ENSMUST00000141697 (Gm14582-001) 52296181-52333679 antisense

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000GF_0001ENSDARG00000015472ENSDART00000026569ENSDARG00000032199ENSDART00000039554ENSDART00000129345ENSDART00000143894CIL_0000GF_0002ENSG00000076716ENST00000370828ENSG00000147257ENST00000370818ENST00000394299ENST00000406757ENSG00000227008ENST00000426577ENSG00000233260ENST00000412013CIL_0000GF_0003ENSMUSG00000031119ENSMUST00000033450ENSMUSG00000055110ENSMUST00000068507ENSMUST00000114854ENSMUSG00000055653ENSMUST00000069360ENSMUST00000114857ENSMUSG00000086704ENSMUST00000141697
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000GF_0001ENSDARG00000015472ENSDART00000026569ENSDARG00000032199ENSDART00000039554ENSDART00000129345CIL_0000GF_0002ENSG00000076716ENST00000370828ENSG00000147257ENST00000370818ENST00000394299ENST00000406757ENSG00000227008ENST00000426577ENSG00000233260ENST00000412013CIL_0000GF_0003ENSMUSG00000031119ENSMUST00000033450ENSMUSG00000055110ENSMUST00000068507ENSMUST00000114854ENSMUSG00000055653ENSMUST00000069360ENSMUST00000114857ENSMUSG00000086704ENSMUST00000141697
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000015472 ENSDART00000026569 N/A N/A N/A N/A N/A N/A 0.762±0.00 0.412±0.10 1.249±0.00 N/A N/A N/A N/A N/A
ENSDARG00000032199 ENSDART00000039554 N/A N/A N/A N/A N/A N/A N/A 0.038±0.00 N/A N/A 0.393±0.00 N/A N/A N/A
ENSDART00000129345 N/A N/A N/A 0.175±0.00 N/A N/A 0.035±0.01 N/A N/A N/A N/A N/A N/A N/A
ENSDART00000143894 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000076716 ENST00000370828 6.281±0.00 3.065±0.00 1.513±0.00 2.130±1.66 3.029±1.06 6.646±4.84 1.478±0.99 5.662±5.58 1.716±1.29 6.739±3.85 2.292±1.17 3.482±2.11 15.034±5.38 7.276±0.06
ENSG00000147257 ENST00000370818 48.222±0.00 5.749±0.00 7.306±0.00 0.343±0.07 21.488±12.54 12.048±10.96 2.160±1.38 15.130±15.00 2.201±1.89 52.009±42.40 1.992±0.00 9.311±8.63 207.368±14.84 3.766±1.41
ENST00000394299 N/A N/A N/A N/A N/A 0.568±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000406757 17.265±0.00 3.619±0.00 N/A N/A 8.593±5.93 6.977±0.00 0.421±0.00 0.316±0.00 N/A 3.349±0.00 0.225±0.00 10.303±10.08 158.969±0.00 2.191±0.00
ENSG00000227008 ENST00000426577 N/A N/A N/A N/A 0.117±0.03 0.228±0.00 N/A 0.030±0.00 N/A N/A 0.119±0.04 0.323±0.04 N/A N/A
ENSG00000233260 ENST00000412013 N/A 0.687±0.00 N/A N/A 0.298±0.00 N/A N/A N/A N/A 0.741±0.00 N/A 0.045±0.00 N/A 0.311±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000031119 ENSMUST00000033450 17.913±7.52 51.979±10.18 16.196±1.23 4.839±1.35 12.853±3.17 16.854±1.05 7.417±0.72 43.351±2.20 7.624±4.80 8.505±0.93 2.675±1.72 44.592±5.61 6.006±3.51 4.517±0.84
ENSMUSG00000055110 ENSMUST00000068507 0.013±0.00 N/A 0.002±0.00 N/A 0.019±0.00 N/A N/A N/A 0.011±0.00 0.012±0.00 N/A 0.034±0.03 0.080±0.07 N/A
ENSMUST00000114854 0.010±0.00 N/A 0.002±0.00 N/A 0.019±0.00 N/A N/A N/A 0.011±0.00 0.012±0.00 N/A 0.034±0.03 0.009±0.00 N/A
ENSMUSG00000055653 ENSMUST00000069360 14.248±3.10 7.245±1.83 24.570±3.30 11.644±7.78 19.724±8.03 2.132±0.69 6.111±1.83 12.460±2.11 105.081±108.71 43.150±13.50 1.935±0.30 13.970±9.15 90.639±92.82 0.496±0.21
ENSMUST00000114857 10.066±5.12 35.140±5.05 N/A 3.662±0.26 36.574±24.46 7.510±1.48 2.002±0.65 6.452±3.98 7.153±15.24 78.712±20.75 N/A 45.251±7.11 N/A 0.389±0.14
ENSMUSG00000086704 ENSMUST00000141697 0.059±0.02 N/A N/A N/A 0.129±0.08 N/A N/A N/A 0.046±0.01 N/A 0.024±0.01 0.117±0.10 0.048±0.02 0.050±0.00

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