C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000426577 RP3-417G15.1-001 ENSG00000227008 9606 + X:133670971-133671386 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastColonKidneyMuscleOvaryENST00000426577
Transcript ID Breast Colon Kidney Muscle Ovary
ENST00000426577 0.117±0.03 0.228±0.00 0.030±0.00 0.119±0.04 0.323±0.04

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000GF CIL_0000GF_0002 CGP X:133300103-133985895
CIL_0000SR CIL_0000SR_0001 CGP X:133535745-134246207

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000169826 Rps24-202 protein_coding Mus_musculus 0 399
ENSMUST00000112384 Rps24-201 protein_coding Mus_musculus 0 398
ENSMUST00000118723 Rps24-ps3-001 processed_pseudogene Mus_musculus 0 394
ENSMUST00000162574 AC122223.2-001 processed_pseudogene Mus_musculus 0 375
ENSMUST00000078768 Gm6030-201 processed_pseudogene Mus_musculus 0 366
ENSMUST00000117908 Gm11878-001 processed_pseudogene Mus_musculus 0 353
ENSMUST00000140330 Gm2830-001 processed_pseudogene Mus_musculus 0 339
ENSMUST00000091375 Rps24-ps2-201 processed_pseudogene Mus_musculus 0 329
ENSMUST00000182679 Gm4832-001 transcribed_processed_pseudogene Mus_musculus 0 307
ENSMUST00000183295 Gm4832-002 processed_transcript Mus_musculus 0 215

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