C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0000HZ_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000196415-ENSG00000197561 CGP 9606 19:840960-856247
GeneTranscriptPositionBiotype
ENSG00000196415 (PRTN3)
proteinase 3 		ENST00000234347 (PRTN3-001) 840960-848175 protein_coding
ENST00000544537 (PRTN3-002) 843341-848175 protein_coding
ENSG00000197561 (ELANE)
elastase, neutrophil expressed 		ENST00000263621 (ELANE-201) 852291-856242 protein_coding
ENST00000590230 (ELANE-001) 851014-856247 protein_coding

Homo sapiens Ensembl (GRCh38)

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CIL_0000HZ_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000057729-ENSMUSG00000020125 CGP 10090 10:79874476-79888216
GeneTranscriptPositionBiotype
ENSMUSG00000020125 (Elane)
elastase, neutrophil expressed 		ENSMUST00000046091 (Elane-201) 79886312-79888216 protein_coding
ENSMUSG00000035835 (BC005764)
lipid phosphate phosphatase-related protein type 3 		ENSMUST00000092325 (BC005764-001) 79864781-79874634 protein_coding
ENSMUST00000113452 (BC005764-003) 79864781-79874366 retained_intron
ENSMUST00000163111 (BC005764-006) 79866854-79874389 processed_transcript
ENSMUST00000165601 (BC005764-005) 79866438-79874408 protein_coding
ENSMUST00000166023 (BC005764-008) 79867459-79874370 protein_coding
ENSMUST00000166057 (BC005764-004) 79864781-79874570 retained_intron
ENSMUST00000167250 (BC005764-002) 79860475-79874570 protein_coding
ENSMUST00000167707 (BC005764-007) 79866908-79874399 protein_coding
ENSMUST00000167897 (BC005764-009) 79866432-79874224 protein_coding
ENSMUST00000170910 (BC005764-010) 79866412-79867281 retained_intron
ENSMUSG00000057729 (Prtn3)
proteinase 3 		ENSMUST00000006679 (Prtn3-001) 79879614-79883174 protein_coding
ENSMUST00000163188 (Prtn3-004) 79874476-79883041 processed_transcript
ENSMUST00000164134 (Prtn3-003) 79881004-79882389 retained_intron
ENSMUST00000165982 (Prtn3-002) 79880980-79883174 retained_intron
ENSMUST00000166201 (Prtn3-005) 79881042-79882844 protein_coding
ENSMUST00000171489 (Prtn3-006) 79881783-79882880 retained_intron

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000HZ_0001ENSG00000196415ENST00000234347ENST00000544537ENSG00000197561ENST00000263621ENST00000590230CIL_0000HZ_0002ENSMUSG00000020125ENSMUST00000046091ENSMUSG00000035835ENSMUST00000092325ENSMUST00000113452ENSMUST00000163111ENSMUST00000165601ENSMUST00000166023ENSMUST00000166057ENSMUST00000167250ENSMUST00000167707ENSMUST00000167897ENSMUST00000170910ENSMUSG00000057729ENSMUST00000006679ENSMUST00000163188ENSMUST00000164134ENSMUST00000165982ENSMUST00000166201ENSMUST00000171489
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000HZ_0001ENSG00000196415ENST00000234347ENST00000544537ENSG00000197561ENST00000263621ENST00000590230CIL_0000HZ_0002ENSMUSG00000020125ENSMUST00000046091ENSMUSG00000035835ENSMUST00000092325ENSMUST00000113452ENSMUST00000165601ENSMUST00000166057ENSMUST00000167250ENSMUSG00000057729ENSMUST00000006679
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000196415 ENST00000234347 22.765±0.00 0.302±0.00 N/A N/A N/A 0.039±0.00 N/A N/A 0.789±0.00 21.619±0.00 0.233±0.00 0.204±0.14 0.951±0.67 0.304±0.17
ENST00000544537 N/A N/A N/A 0.697±0.00 N/A N/A N/A N/A N/A N/A N/A 0.009±0.00 N/A N/A
ENSG00000197561 ENST00000263621 34.951±0.00 0.480±0.00 N/A 0.277±0.19 0.916±0.00 0.495±0.00 N/A N/A 0.852±0.00 49.734±0.00 0.087±0.00 0.412±0.00 0.869±0.96 0.471±0.00
ENST00000590230 N/A N/A N/A N/A N/A 0.984±0.00 0.634±0.00 0.415±0.00 N/A N/A N/A 1.086±0.00 N/A 0.948±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000020125 ENSMUST00000046091 0.698±0.45 0.406±0.29 0.060±0.04 0.189±0.00 2.116±0.87 0.107±0.05 0.097±0.05 0.067±0.00 35.232±37.66 0.344±0.10 0.111±0.03 0.482±0.36 0.042±0.02 0.089±0.04
ENSMUSG00000035835 ENSMUST00000092325 N/A N/A N/A 55.380±32.95 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000113452 N/A N/A N/A 73.623±42.29 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000163111 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000165601 N/A N/A N/A 260.697±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000166023 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000166057 N/A N/A N/A 164.765±74.51 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000167250 N/A N/A N/A N/A 11.848±0.89 9.671±1.01 N/A N/A N/A N/A N/A 23.594±3.13 N/A N/A
ENSMUST00000167707 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000167897 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000170910 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000057729 ENSMUST00000006679 N/A N/A N/A N/A N/A N/A N/A N/A 134.334±20.12 N/A N/A N/A N/A N/A
ENSMUST00000163188 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000164134 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000165982 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000166201 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000171489 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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