C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0000IG_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000188611-ENSG00000198964 CGP 9606 10:50182778-50625163
GeneTranscriptPositionBiotype
ENSG00000225137 (DYNC1I2P1)
dynein, cytoplasmic 1, intermediate chain 2 pseudogene 1 		ENST00000435916 (DYNC1I2P1-001) 50264978-50266815 processed_pseudogene
ENSG00000225303 (RP11-512N4.2)
 ENST00000437213 (RP11-512N4.2-001) 50472814-50474246 antisense
ENSG00000226200 (SGMS1-AS1)
SGMS1 antisense RNA 1 		ENST00000443374 (SGMS1-AS1-001) 50624951-50641451 antisense
ENST00000609579 (SGMS1-AS1-002) 50624963-50629972 antisense
ENSG00000279027 (RP11-521C22.3)
 ENST00000623158 (RP11-521C22.3-001) 50393006-50394561 TEC
ENSG00000279863 (RP11-521C22.2)
 ENST00000624562 (RP11-521C22.2-001) 50334538-50336123 TEC
CIL_0000IG_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000024887-ENSMUSG00000040451 CGP 10090 19:31984654-32389714
GeneTranscriptPositionBiotype
ENSMUSG00000024887 (Asah2)
N-acylsphingosine amidohydrolase 2 		ENSMUST00000096119 (Asah2-201) 31984654-32061469 protein_coding
ENSMUSG00000040451 (Sgms1)
sphingomyelin synthase 1 		ENSMUST00000099514 (Sgms1-001) 32122727-32388512 protein_coding
ENSMUST00000124012 (Sgms1-005) 32158256-32389714 retained_intron
ENSMUST00000124483 (Sgms1-006) 32220587-32289579 retained_intron
ENSMUST00000126332 (Sgms1-011) 32223318-32238826 retained_intron
ENSMUST00000131768 (Sgms1-010) 32160299-32276926 processed_transcript
ENSMUST00000134415 (Sgms1-007) 32124147-32160223 nonsense_mediated_decay
ENSMUST00000141252 (Sgms1-008) 32289279-32388463 retained_intron
ENSMUST00000141655 (Sgms1-009) 32160170-32323229 processed_transcript
ENSMUST00000142618 (Sgms1-002) 32122730-32349316 protein_coding
ENSMUST00000149107 (Sgms1-012) 32160158-32238812 processed_transcript
ENSMUST00000149934 (Sgms1-013) 32218757-32248009 processed_transcript
ENSMUST00000151289 (Sgms1-004) 32123479-32210990 protein_coding
ENSMUST00000151822 (Sgms1-014) 32160061-32196428 protein_coding
ENSMUST00000152340 (Sgms1-003) 32124145-32276952 nonsense_mediated_decay
ENSMUSG00000097787 (2700046G09Rik)
RIKEN cDNA 2700046G09 gene 		ENSMUST00000181612 (2700046G09Rik-201) 32389216-32391184 lincRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000IG_0001ENSG00000225137ENST00000435916ENSG00000225303ENST00000437213ENSG00000226200ENST00000443374ENST00000609579ENSG00000279027ENST00000623158ENSG00000279863ENST00000624562CIL_0000IG_0002ENSMUSG00000024887ENSMUST00000096119ENSMUSG00000040451ENSMUST00000099514ENSMUST00000124012ENSMUST00000124483ENSMUST00000126332ENSMUST00000131768ENSMUST00000134415ENSMUST00000141252ENSMUST00000141655ENSMUST00000142618ENSMUST00000149107ENSMUST00000149934ENSMUST00000151289ENSMUST00000151822ENSMUST00000152340ENSMUSG00000097787ENSMUST00000181612
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000IG_0001ENSG00000225137ENST00000435916ENSG00000225303ENST00000437213ENSG00000226200ENST00000443374ENSG00000279027ENST00000623158ENSG00000279863ENST00000624562CIL_0000IG_0002ENSMUSG00000024887ENSMUST00000096119ENSMUSG00000040451ENSMUST00000099514ENSMUST00000134415ENSMUST00000141252ENSMUST00000141655ENSMUST00000151289ENSMUST00000152340ENSMUSG00000097787ENSMUST00000181612
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000225137 ENST00000435916 N/A N/A 0.087±0.00 0.084±0.06 0.006±0.00 0.006±0.00 N/A 0.013±0.00 N/A 0.006±0.00 0.148±0.14 0.038±0.03 N/A 0.016±0.01
ENSG00000225303 ENST00000437213 N/A N/A N/A 0.072±0.00 N/A N/A N/A N/A 1.466±0.00 N/A N/A N/A N/A N/A
ENSG00000226200 ENST00000443374 N/A 0.792±0.00 0.333±0.00 N/A 0.268±0.00 0.293±0.00 N/A N/A 0.136±0.00 N/A 0.059±0.00 0.397±0.04 N/A 1.250±0.00
ENST00000609579 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000279027 ENST00000623158 N/A 0.014±0.00 1.481±0.00 0.434±0.40 1.445±0.00 1.680±0.00 0.361±0.35 0.440±0.40 1.969±0.00 2.680±0.00 0.080±0.04 0.283±0.38 N/A N/A
ENSG00000279863 ENST00000624562 0.497±0.00 0.485±0.00 0.344±0.00 0.706±0.08 0.204±0.06 0.103±0.02 0.071±0.02 0.448±0.13 0.376±0.23 0.520±0.23 0.354±0.12 0.354±0.20 0.189±0.03 0.401±0.12
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000024887 ENSMUST00000096119 3.132±0.58 5.923±0.90 N/A 0.312±0.00 3.086±1.68 3.035±0.39 1.069±0.03 4.801±1.28 1.242±1.26 3.008±0.66 N/A 7.199±3.54 1.544±0.92 0.596±0.25
ENSMUSG00000040451 ENSMUST00000099514 4.381±0.63 3.119±0.39 5.486±0.36 2.266±0.25 1.908±0.28 2.963±0.89 3.717±1.07 3.904±0.75 2.924±1.46 4.607±0.46 7.515±1.37 6.143±2.23 5.052±2.14 N/A
ENSMUST00000124012 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000124483 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000126332 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000131768 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000134415 4.054±0.00 7.915±1.48 N/A 6.943±0.00 4.335±0.66 5.936±1.69 N/A 4.105±0.00 2.336±1.15 N/A N/A 12.671±4.56 8.540±4.48 54.907±12.72
ENSMUST00000141252 N/A 18.877±5.15 N/A N/A 8.479±0.99 6.922±1.76 N/A N/A 1.849±0.00 N/A N/A 15.136±3.73 N/A N/A
ENSMUST00000141655 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 26.908±0.00 N/A 260.444±0.00
ENSMUST00000142618 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000149107 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000149934 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000151289 6.125±2.32 5.848±1.47 8.269±0.37 2.149±1.08 6.291±3.70 4.241±1.25 7.128±1.83 7.904±1.14 4.082±2.52 15.940±5.81 5.606±1.32 6.826±2.61 10.834±5.21 20.509±0.00
ENSMUST00000151822 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000152340 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 35.043±15.50
ENSMUSG00000097787 ENSMUST00000181612 6.401±0.66 6.861±1.25 N/A 2.449±0.00 4.330±0.51 N/A N/A 5.495±1.39 1.437±0.21 N/A N/A 5.016±0.00 N/A N/A

Loading