C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: keratin 8 pseudogene 15
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000425226 KRT8P15-001 ENSG00000233579 9606 - 2:202840331-202841781 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartLiverMuscleOvaryPlacentaTestisENST00000425226
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Liver Muscle Ovary Placenta Testis
ENST00000425226 0.012±0.00 0.013±0.00 0.152±0.00 0.180±0.12 0.024±0.00 0.091±0.00 0.061±0.00 0.059±0.00 0.879±0.00 0.132±0.02 0.101±0.00 0.718±0.66

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000JO CIL_0000JO_0002 CGP 2:202635188-202871985
CIL_00020R CIL_00020R_0001 CGP 2:202773150-203014798

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000023952 Krt8-201 protein_coding Mus_musculus 0 1086
ENSMUST00000068904 Krt7-001 protein_coding Mus_musculus 0 392
ENSMUST00000023709 Krt5-001 protein_coding Mus_musculus 0 350
ENSMUST00000131069 Krt7-002 retained_intron Mus_musculus 0 291
ENSMUST00000023788 Krt6a-201 protein_coding Mus_musculus 0 261
ENSMUST00000023786 Krt6b-201 protein_coding Mus_musculus 0 255
ENSMUST00000100179 Krt76-001 protein_coding Mus_musculus 0 244
ENSMUST00000023797 Krt4-201 protein_coding Mus_musculus 0 200
ENSMUST00000147662 Krt7-003 protein_coding Mus_musculus 7e-31 139
ENSDART00000028270 gfap-001 protein_coding Danio_rerio 0.00003 55

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