C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0000KU_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000013343-ENSDARG00000058050 CGP 7955 17:11370543-11921583
GeneTranscriptPositionBiotype
ENSDARG00000013343 (kif26ba)
kinesin family member 26Ba 		ENSDART00000013170 (kif26ba-001) 11370543-11579627 protein_coding
ENSDARG00000058050 (smyd3)
SET and MYND domain containing 3 		ENSDART00000080847 (smyd3-201) 11592197-11921583 protein_coding
ENSDART00000105236 (smyd3-001) 11592332-11921583 protein_coding
CIL_0000KU_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000162849-ENSG00000185420 CGP 9606 1:245154985-246507312
GeneTranscriptPositionBiotype
ENSG00000162849 (KIF26B)
kinesin family member 26B 		ENST00000366518 (KIF26B-001) 245511002-245709431 protein_coding
ENST00000407071 (KIF26B-005) 245154985-245703126 protein_coding
ENST00000479506 (KIF26B-004) 245353678-245371717 processed_transcript
ENST00000483253 (KIF26B-003) 245646092-245687314 retained_intron
ENSG00000202184 (RNU6-1283P)
RNA, U6 small nuclear 1283, pseudogene 		ENST00000365314 (RNU6-1283P-201) 246189014-246189118 snRNA
ENSG00000225222 (CHCHD4P5)
coiled-coil-helix-coiled-coil-helix domain containing 4 pseudogene 5 		ENST00000436684 (CHCHD4P5-001) 246178778-246179204 processed_pseudogene
ENSG00000226876 (RP11-36N20.1)
 ENST00000443763 (RP11-36N20.1-001) 246108626-246113866 antisense
ENSG00000230184 (SMYD3-IT1)
SMYD3 intronic transcript 1 (non-protein coding) 		ENST00000426929 (SMYD3-IT1-001) 246321663-246322438 sense_intronic
ENSG00000231612 (RP11-522M21.3)
 ENST00000414565 (RP11-522M21.3-001) 245673732-245676478 antisense
ENSG00000232192 (RP11-62I21.1)
 ENST00000446321 (RP11-62I21.1-001) 245206444-245234501 antisense
ENSG00000232793 (DNAJC19P8)
DnaJ (Hsp40) homolog, subfamily C, member 19 pseudogene 8 		ENST00000452887 (DNAJC19P8-001) 245282831-245283089 processed_pseudogene
ENSG00000235096 (RP11-83A16.1)
 ENST00000426386 (RP11-83A16.1-001) 246025897-246035603 antisense
ENSG00000238224 (RP11-522M21.2)
 ENST00000418402 (RP11-522M21.2-001) 245614773-245615145 antisense
CIL_0000KU_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000026494-ENSMUSG00000055067 CGP 10090 1:178529125-179518041
GeneTranscriptPositionBiotype
ENSMUSG00000026494 (Kif26b)
kinesin family member 26B 		ENSMUST00000160789 (Kif26b-001) 178798438-178932855 protein_coding
ENSMUST00000161017 (Kif26b-002) 178529125-178932730 protein_coding
ENSMUSG00000055067 (Smyd3)
SET and MYND domain containing 3 		ENSMUST00000068437 (Smyd3-002) 178955046-179248840 processed_transcript
ENSMUST00000111134 (Smyd3-004) 179395224-179518041 protein_coding
ENSMUST00000125756 (Smyd3-005) 179377535-179405419 processed_transcript
ENSMUST00000128302 (Smyd3-001) 178951960-179518034 protein_coding
ENSMUST00000129393 (Smyd3-006) 178957250-178989345 processed_transcript
ENSMUST00000131684 (Smyd3-003) 178955151-179374103 processed_transcript
ENSMUSG00000089713 (Gm16564)
predicted gene 16564 		ENSMUST00000162545 (Gm16564-001) 178898582-178917614 antisense

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000KU_0001ENSDARG00000013343ENSDART00000013170ENSDARG00000058050ENSDART00000080847ENSDART00000105236CIL_0000KU_0002ENSG00000162849ENST00000366518ENST00000407071ENST00000479506ENST00000483253ENSG00000202184ENST00000365314ENSG00000225222ENST00000436684ENSG00000226876ENST00000443763ENSG00000230184ENST00000426929ENSG00000231612ENST00000414565ENSG00000232192ENST00000446321ENSG00000232793ENST00000452887ENSG00000235096ENST00000426386ENSG00000238224ENST00000418402CIL_0000KU_0003ENSMUSG00000026494ENSMUST00000160789ENSMUST00000161017ENSMUSG00000055067ENSMUST00000068437ENSMUST00000111134ENSMUST00000125756ENSMUST00000128302ENSMUST00000129393ENSMUST00000131684ENSMUSG00000089713ENSMUST00000162545
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000KU_0001ENSDARG00000013343ENSDART00000013170ENSDARG00000058050ENSDART00000080847ENSDART00000105236CIL_0000KU_0002ENSG00000162849ENST00000366518ENST00000407071ENST00000479506ENST00000483253ENSG00000202184ENST00000365314ENSG00000225222ENST00000436684ENSG00000226876ENST00000443763ENSG00000230184ENST00000426929ENSG00000231612ENST00000414565ENSG00000232192ENST00000446321ENSG00000232793ENST00000452887ENSG00000235096ENST00000426386ENSG00000238224ENST00000418402CIL_0000KU_0003ENSMUSG00000026494ENSMUST00000160789ENSMUST00000161017ENSMUSG00000055067ENSMUST00000068437ENSMUST00000111134ENSMUST00000128302ENSMUST00000129393ENSMUST00000131684ENSMUSG00000089713ENSMUST00000162545
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000013343 ENSDART00000013170 N/A N/A N/A N/A N/A N/A 1.067±0.15 0.515±0.12 N/A N/A N/A N/A N/A N/A
ENSDARG00000058050 ENSDART00000080847 N/A N/A N/A 0.238±0.09 N/A N/A 0.516±0.00 4.596±0.71 N/A N/A N/A N/A N/A N/A
ENSDART00000105236 N/A N/A N/A 2.703±0.29 N/A N/A 1.810±0.83 1.980±0.00 0.467±0.00 N/A 0.911±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000162849 ENST00000366518 0.002±0.00 0.531±0.00 N/A 0.512±0.11 N/A 0.193±0.00 0.138±0.01 0.169±0.00 0.058±0.00 0.058±0.00 N/A 0.200±0.18 0.860±0.79 N/A
ENST00000407071 0.044±0.00 0.282±0.00 N/A N/A 0.112±0.00 N/A 0.667±0.00 0.270±0.00 0.045±0.00 0.133±0.00 0.010±0.00 0.576±0.21 1.398±1.07 0.880±0.20
ENST00000479506 N/A N/A 0.577±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000483253 N/A N/A N/A N/A N/A N/A 0.134±0.00 N/A 0.193±0.00 0.140±0.00 N/A N/A N/A N/A
ENSG00000202184 ENST00000365314 N/A N/A N/A N/A N/A N/A 0.680±0.00 N/A N/A N/A N/A N/A N/A 0.317±0.00
ENSG00000225222 ENST00000436684 N/A 0.033±0.00 N/A N/A 0.960±0.00 0.465±0.43 0.217±0.12 1.605±0.00 1.166±0.00 0.097±0.00 N/A 0.051±0.00 N/A 0.049±0.00
ENSG00000226876 ENST00000443763 N/A N/A N/A 0.048±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.125±0.00
ENSG00000230184 ENST00000426929 0.047±0.00 0.143±0.00 N/A 0.585±0.43 0.048±0.00 0.131±0.00 0.042±0.00 N/A N/A 0.081±0.00 N/A 0.184±0.00 N/A 0.044±0.00
ENSG00000231612 ENST00000414565 0.082±0.00 0.055±0.00 N/A 0.331±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.118±0.00 0.837±0.25
ENSG00000232192 ENST00000446321 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.212±0.09 N/A 0.100±0.02 0.041±0.00 0.083±0.00
ENSG00000232793 ENST00000452887 N/A 0.061±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.056±0.00
ENSG00000235096 ENST00000426386 0.020±0.00 0.230±0.00 0.180±0.00 0.021±0.00 0.042±0.00 0.116±0.00 0.133±0.00 0.063±0.00 0.055±0.00 0.099±0.00 N/A 0.047±0.00 N/A 0.178±0.14
ENSG00000238224 ENST00000418402 N/A 0.130±0.00 N/A N/A 0.264±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000026494 ENSMUST00000160789 N/A 0.021±0.00 N/A 1.423±0.00 N/A 0.084±0.05 N/A N/A 0.026±0.01 0.795±0.00 0.082±0.03 1.104±0.00 0.199±0.08 0.028±0.00
ENSMUST00000161017 0.054±0.01 0.118±0.04 N/A 0.389±0.00 0.087±0.03 0.199±0.09 0.148±0.05 0.276±0.07 0.039±0.02 0.609±0.15 0.116±0.03 0.961±0.22 0.265±0.27 0.149±0.06
ENSMUSG00000055067 ENSMUST00000068437 0.387±0.00 0.727±0.25 N/A N/A 0.738±0.33 1.223±0.61 0.333±0.14 0.920±0.15 0.632±0.19 0.608±0.00 N/A 1.387±0.68 N/A 0.239±0.00
ENSMUST00000111134 2.361±1.56 0.558±0.04 3.360±0.00 2.746±0.46 1.924±0.97 2.153±0.44 1.053±0.22 2.605±0.22 1.826±1.22 N/A 0.778±0.22 2.446±1.10 1.736±1.08 0.779±0.51
ENSMUST00000125756 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000128302 0.515±0.12 0.537±0.10 0.846±0.24 1.211±0.64 0.516±0.13 0.525±0.22 0.203±0.05 0.558±0.11 0.180±0.07 0.722±0.18 0.499±0.09 0.717±0.22 0.114±0.06 0.219±0.11
ENSMUST00000129393 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.389±0.00 N/A
ENSMUST00000131684 1.066±0.56 0.842±0.00 1.509±0.03 2.529±0.84 0.968±0.23 1.153±0.41 0.852±0.24 1.144±0.37 0.820±0.25 2.077±0.66 0.534±0.16 1.512±0.82 0.486±0.30 0.615±0.29
ENSMUSG00000089713 ENSMUST00000162545 N/A 0.205±0.06 N/A N/A 0.155±0.10 0.208±0.07 0.150±0.04 0.214±0.06 0.022±0.01 1.601±0.22 0.048±0.02 1.660±0.52 0.052±0.01 0.080±0.01

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