C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: SET and MYND domain containing 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000068437 Smyd3-002 ENSMUSG00000055067 10090 - 1:178955046-179248840 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonHeartKidneyLiverLungOvaryTestisENSMUST00000068437
Transcript ID Adipose Adrenal Breast Colon Heart Kidney Liver Lung Ovary Testis
ENSMUST00000068437 0.387±0.00 0.727±0.25 0.738±0.33 1.223±0.61 0.333±0.14 0.920±0.15 0.632±0.19 0.608±0.00 1.387±0.68 0.239±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000KU CIL_0000KU_0003 CGP 1:178529125-179518041
CIL_0007AO CIL_0007AO_0003 CGP 1:178951960-179546267

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000366516 SMYD3-003 retained_intron Homo_sapiens 0 902
ENST00000366517 SMYD3-002 processed_transcript Homo_sapiens 0 905
ENST00000391836 SMYD3-013 protein_coding Homo_sapiens 0 597
ENST00000464398 SMYD3-006 processed_transcript Homo_sapiens 0 436
ENST00000470510 SMYD3-009 processed_transcript Homo_sapiens 0 643
ENST00000483072 SMYD3-017 processed_transcript Homo_sapiens 8.00001e-41 171
ENST00000488153 SMYD3-016 processed_transcript Homo_sapiens 0 303
ENST00000490107 SMYD3-001 protein_coding Homo_sapiens 0 902
ENST00000492487 SMYD3-005 processed_transcript Homo_sapiens 0 649
ENST00000493441 SMYD3-008 processed_transcript Homo_sapiens 0 797

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