C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0000MQ_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000010946-ENSDARG00000015325 CGP 7955 9:9404591-9464189
GeneTranscriptPositionBiotype
ENSDARG00000010946 (cbsb)
cystathionine-beta-synthase b
ENSDART00000026275 (cbsb-201) 9404591-9450364 protein_coding
ENSDART00000121665 (cbsb-001) 9405249-9450353 protein_coding
ENSDARG00000015325 (u2af1)
U2(RNU2) small nuclear RNA auxiliary factor 1
ENSDART00000021191 (u2af1-001) 9451858-9464189 protein_coding
CIL_0000MQ_0002 (Click to Hide/Show)
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Warning (2): Invalid argument supplied for foreach() [APP/View/Region/show.ctp, line 46]
Source ID Type Tax ID Position
ENSG00000160200-ENSG00000160201 CGP 9606 21:43053191-43107587
GeneTranscriptPositionBiotype
CIL_0000MQ_0003 (Click to Hide/Show)
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Source ID Type Tax ID Position
ENSG00000274276-ENSG00000275895 CGP 9606 21:6444869-6499261
GeneTranscriptPositionBiotype
CIL_0000MQ_0004 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000024039-ENSMUSG00000061613 CGP 10090 17:31612623-31658754
GeneTranscriptPositionBiotype
ENSMUSG00000024039 (Cbs)
cystathionine beta-synthase
ENSMUST00000067801 (Cbs-001) 31612623-31637199 protein_coding
ENSMUST00000078509 (Cbs-002) 31612641-31637165 protein_coding
ENSMUST00000118504 (Cbs-003) 31612640-31637165 protein_coding
ENSMUST00000128351 (Cbs-006) 31620947-31626188 processed_transcript
ENSMUST00000135425 (Cbs-005) 31625131-31636649 protein_coding
ENSMUST00000143982 (Cbs-007) 31621472-31623058 processed_transcript
ENSMUST00000151597 (Cbs-008) 31617165-31617873 retained_intron
ENSMUST00000151718 (Cbs-009) 31627525-31636649 protein_coding
ENSMUST00000155814 (Cbs-004) 31625077-31636790 protein_coding
ENSMUSG00000061613 (U2af1)
U2 small nuclear ribonucleoprotein auxiliary factor (U2AF) 1
ENSMUST00000014684 (U2af1-201) 31647082-31658754 protein_coding
ENSMUST00000166526 (U2af1-202) 31647082-31658754 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000MQ_0001ENSDARG00000010946ENSDART00000026275ENSDART00000121665ENSDARG00000015325ENSDART00000021191CIL_0000MQ_0004ENSMUSG00000024039ENSMUST00000067801ENSMUST00000078509ENSMUST00000118504ENSMUST00000128351ENSMUST00000135425ENSMUST00000143982ENSMUST00000151597ENSMUST00000151718ENSMUST00000155814ENSMUSG00000061613ENSMUST00000014684ENSMUST00000166526
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000MQ_0001ENSDARG00000010946ENSDART00000026275ENSDART00000121665ENSDARG00000015325ENSDART00000021191CIL_0000MQ_0004ENSMUSG00000024039ENSMUST00000067801ENSMUST00000078509ENSMUST00000118504ENSMUST00000128351ENSMUST00000135425ENSMUST00000151597ENSMUST00000155814ENSMUSG00000061613ENSMUST00000014684ENSMUST00000166526
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000010946 ENSDART00000026275 N/A N/A N/A 33.129±13.10 N/A N/A 0.831±0.24 19.801±2.10 2.785±0.00 N/A 3.327±0.00 N/A N/A N/A
ENSDART00000121665 N/A N/A N/A 5.928±0.00 N/A N/A 1.097±0.00 3.613±0.00 N/A N/A N/A N/A N/A N/A
ENSDARG00000015325 ENSDART00000021191 N/A N/A N/A 13.770±10.57 N/A N/A 21.445±2.67 18.245±6.79 3.088±0.00 N/A 11.340±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000024039 ENSMUST00000067801 1.320±0.21 0.318±0.21 N/A 1.119±0.97 0.634±0.04 14.974±3.47 0.156±0.08 21.062±2.95 115.893±91.14 0.791±0.21 0.065±0.03 23.266±10.85 0.267±0.17 0.746±0.25
ENSMUST00000078509 2.381±1.14 0.336±0.11 0.361±0.08 1.213±0.47 1.224±0.47 12.086±4.63 0.118±0.01 30.398±11.46 84.126±77.45 1.222±0.37 0.060±0.05 47.489±8.86 0.130±0.07 0.828±0.83
ENSMUST00000118504 0.739±0.00 0.119±0.00 0.089±0.00 N/A 0.558±0.00 5.131±1.31 0.145±0.00 6.275±0.62 21.914±20.33 0.457±0.00 0.040±0.01 10.649±0.47 0.097±0.03 0.481±0.38
ENSMUST00000128351 N/A N/A N/A 17.711±0.00 N/A N/A 0.307±0.09 N/A N/A N/A N/A 62.377±0.00 0.481±0.20 0.161±0.00
ENSMUST00000135425 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.061±0.03 N/A N/A N/A
ENSMUST00000143982 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000151597 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.123±0.01 N/A 0.166±0.00 N/A
ENSMUST00000151718 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000155814 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.052±0.03 16.102±0.00 0.258±0.00 N/A
ENSMUSG00000061613 ENSMUST00000014684 18.655±4.86 3.714±0.70 55.130±5.70 46.991±13.93 9.344±3.00 9.762±2.69 10.858±1.09 20.988±3.90 56.807±43.72 11.423±1.13 23.149±2.18 26.385±23.25 81.475±27.52 12.762±4.73
ENSMUST00000166526 N/A N/A 9.667±1.14 16.444±0.00 N/A N/A 3.718±0.60 3.603±0.07 23.686±4.84 N/A 3.227±0.53 8.168±3.16 21.541±8.64 6.732±0.49

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