C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0000ND_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000205808-ENSG00000106993 CGP 9606 9:4662315-4708398
GeneTranscriptPositionBiotype
ENSG00000106993 (CDC37L1)
cell division cycle 37-like 1 		ENST00000381854 (CDC37L1-001) 4679566-4708398 protein_coding
ENST00000381858 (CDC37L1-002) 4679559-4703208 protein_coding
ENST00000479095 (CDC37L1-003) 4679715-4685475 processed_transcript
ENSG00000205808 (PPAPDC2)
phosphatidic acid phosphatase type 2 domain containing 2 		ENST00000381883 (PPAPDC2-001) 4662315-4665258 protein_coding
ENSG00000273061 (CDC37L1-AS1)
CDC37L1 antisense RNA 1 (head to head) 		ENST00000607997 (CDC37L1-AS1-001) 4678819-4679502 lincRNA
ENST00000609131 (CDC37L1-AS1-002) 4676600-4679471 lincRNA

Homo sapiens Ensembl (GRCh38)

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CIL_0000ND_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000040105-ENSMUSG00000024780 CGP 10090 19:28963953-29017569
GeneTranscriptPositionBiotype
ENSMUSG00000024780 (Cdc37l1)
cell division cycle 37-like 1 		ENSMUST00000050148 (Cdc37l1-201) 28990494-29017569 protein_coding
ENSMUSG00000040105 (Ppapdc2)
phosphatidic acid phosphatase type 2 domain containing 2 		ENSMUST00000045674 (Ppapdc2-001) 28963953-28966811 protein_coding
ENSMUSG00000063754 (Gm10136)
predicted pseudogene 10136 		ENSMUST00000183196 (Gm10136-001) 29003408-29003842 processed_pseudogene
ENSMUSG00000064202 (4430402I18Rik)
RIKEN cDNA 4430402I18 gene 		ENSMUST00000025872 (4430402I18Rik-001) 28923064-28964154 protein_coding
ENSMUST00000159655 (4430402I18Rik-004) 28923533-28929227 processed_transcript
ENSMUST00000160542 (4430402I18Rik-007) 28923688-28963587 protein_coding
ENSMUST00000161813 (4430402I18Rik-005) 28948731-28963908 protein_coding
ENSMUST00000162110 (4430402I18Rik-003) 28923530-28967800 protein_coding
ENSMUST00000164777 (4430402I18Rik-006) 28923688-28963587 protein_coding
ENSMUST00000175647 (4430402I18Rik-002) 28901268-28967730 nonsense_mediated_decay
ENSMUST00000179171 (4430402I18Rik-201) 28893042-28911879 protein_coding

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000ND_0001ENSG00000106993ENST00000381854ENST00000381858ENST00000479095ENSG00000205808ENST00000381883ENSG00000273061ENST00000607997ENST00000609131CIL_0000ND_0002ENSMUSG00000024780ENSMUST00000050148ENSMUSG00000040105ENSMUST00000045674ENSMUSG00000063754ENSMUST00000183196ENSMUSG00000064202ENSMUST00000025872ENSMUST00000159655ENSMUST00000160542ENSMUST00000161813ENSMUST00000162110ENSMUST00000164777ENSMUST00000175647ENSMUST00000179171
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000ND_0001ENSG00000106993ENST00000381854ENST00000381858ENSG00000205808ENST00000381883ENSG00000273061ENST00000607997ENST00000609131CIL_0000ND_0002ENSMUSG00000024780ENSMUST00000050148ENSMUSG00000040105ENSMUST00000045674ENSMUSG00000063754ENSMUST00000183196ENSMUSG00000064202ENSMUST00000025872ENSMUST00000159655ENSMUST00000161813ENSMUST00000162110ENSMUST00000164777ENSMUST00000179171
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000106993 ENST00000381854 3.476±0.00 3.795±0.00 2.172±0.00 5.884±0.99 2.382±1.36 4.221±0.00 3.850±0.95 4.254±0.66 5.091±0.06 3.529±0.32 4.969±1.84 3.067±0.91 1.535±0.33 5.915±1.05
ENST00000381858 4.612±0.00 4.169±0.00 N/A 5.376±0.00 3.237±1.86 2.836±0.01 5.635±3.63 4.789±0.00 4.569±0.16 3.471±0.00 6.132±0.00 3.095±1.02 1.010±0.12 4.039±1.20
ENST00000479095 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000205808 ENST00000381883 3.140±0.00 4.062±0.00 1.521±0.00 2.704±1.19 2.648±0.40 1.160±0.30 0.590±0.42 2.496±0.24 4.153±2.00 1.480±0.81 0.311±0.00 2.994±0.88 4.968±1.09 3.104±0.29
ENSG00000273061 ENST00000607997 0.274±0.00 N/A 1.654±0.00 0.788±0.30 0.419±0.00 N/A 0.080±0.00 1.194±0.70 0.654±0.58 0.845±0.00 N/A 0.485±0.26 0.181±0.06 4.526±3.11
ENST00000609131 0.733±0.00 1.627±0.00 N/A 2.543±1.49 0.718±0.24 0.299±0.15 0.909±0.00 2.173±1.53 0.669±0.03 3.428±0.00 11.359±0.00 3.860±3.94 0.308±0.11 3.381±0.32
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000024780 ENSMUST00000050148 4.761±1.73 18.719±8.02 14.730±1.53 7.909±2.80 2.889±0.58 3.601±1.66 11.584±1.12 6.224±1.45 5.459±1.49 6.700±1.09 11.271±1.45 6.784±3.08 6.421±1.98 9.596±2.72
ENSMUSG00000040105 ENSMUST00000045674 10.080±0.60 23.696±4.20 3.629±1.69 5.895±4.56 10.886±4.15 21.641±3.03 3.105±0.44 10.555±1.60 3.709±2.19 11.126±0.91 1.163±0.14 9.604±1.81 2.962±1.41 22.684±2.19
ENSMUSG00000063754 ENSMUST00000183196 0.537±0.35 0.418±0.13 1.003±0.06 0.650±0.04 1.035±0.62 0.556±0.22 0.504±0.40 0.234±0.08 1.526±2.50 0.473±0.21 0.177±0.04 1.581±0.76 0.441±0.28 0.640±0.30
ENSMUSG00000064202 ENSMUST00000025872 N/A N/A N/A N/A N/A N/A 1.845±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000159655 N/A N/A N/A N/A N/A N/A N/A N/A 4.491±0.00 N/A N/A N/A N/A 113.843±0.00
ENSMUST00000160542 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000161813 N/A N/A N/A N/A N/A N/A 13.929±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000162110 N/A N/A N/A N/A N/A N/A 2.334±0.60 N/A N/A N/A 0.764±0.00 N/A N/A 97.875±30.77
ENSMUST00000164777 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.886±0.00 N/A N/A N/A
ENSMUST00000175647 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000179171 4.545±1.84 N/A N/A 7.560±6.55 N/A 12.257±2.26 N/A 30.141±5.74 N/A 5.249±0.93 0.508±0.08 6.064±2.09 5.252±3.25 N/A

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